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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5348 cluster # 5348       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5348#0 length = 904 sequences # 3  

consensusID : consensus_5348#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 904
fasta sequence
                              [AATTAAAATAAACAAAAAATAGTGACTCATGCATCTTACGATACAGTGGTAGATTGGATACGATCTGCAAAGCATGTTCTTCATGTACAAGTTACACGGTGGGGTTTCAATACTCAAGCAAGTGCAGAAACAAAACCATCAACTAAACGTTTCTCAGATCCATCTGTACTCAATACATTTACGTCTGTTTTACTTGGTAAAGATAATGAAATTAAAAATTTTCTATCTCCAGTTGATACATGTCGAGAATTAATTAATACAAAAACTTTAAACGTATTATCCTCAATCGAAAGTGGTGCGAGCTGGTTGGTGCCCCGTCAAATTGTATCAAGGTATCGTCGTGCAAGTTTTCCAAACATTGGTTATAAAAGAGAGCATATTCCCACTACCGTTCTACAGCCTCTCCCAAATTACTCAACAACTTCAATAAACCTTCAAGGAGATACGAATTTCGATAAGATCTCAATTTTAATAAATGACGAACCAGAAATCGAAGCAACAATCCGTCCCATCAAGCCTGGAAGTGAAACTGAAATATCAATCGCAATAAATAATTCTTGTGGTCTAGG-AATAGGCTGTATAGGAGGCTGTGAAACAGCACTAAATATTCCAGTTATACATGAAATCTATCCTAATGGTGCAGCGGCAAAAGATGGACGTTTACGCCCAGGGGATCGAATTAGTAAAGTCAATCGAATATCATTAGCCGGTGTGCCATTTTTGGAAGCTATGAATAAACTTCAAATGGCTTATATTAGCAAATCGTCCATGATAAAACTAGATTCAGATGATGAAAATGAAAATATTTCTTTATTAAATCAAGAGCAAAGTTATTTAAATCTCACCATATTTCGACCAACAGAACANAGTCAAAAATGGTATGATCAAGAATTAAATATTGAAT]

[+] EMBL CD183368             [AATTAAAATAAACAAAAAATAGTGACTCATGCATCTTACGATACAGTGGTAGATTGGATACGATCTGCAAAGCATGTTCTTCATGTACAAGTTACACGGTGGGGTTTCAATACTCAAGCAAGTGCAGAAACAAAACCATCAACTAAACGTTTCTCAGATCCATCTGTACTCAATACATTTACGTCTGTTTTACTTGGTAAAGATAATGAAATTAAAAATTTTCTATCTCCAGTTGATACATGTCGAGAATTAATTAATACAAAAACTTTAAACGTATTATCCTCAATCGAAAGTGGTGCGAGCTGGTTGGTGCCCCGTCAAATTGTATCAAGGTATCGTCGTGCAAGTTTTCCAAACATTGGTTATAAAAGAGAGCATATTCCCACTACCGTTCTACAGCCTCTCCCAAATTACTCAACAACTTCAATAAACCTTCAAGGAGATACGAATTTCGATAAGATCTCAATTTTAATANATGACGAACCAGAAATCGAAGCAACAATCCGTCCCATCAAGCCTGGAAGTGAAACTGAAATATCAATCGCAATAAATAATTCTTGTGGTCTAGGAAATAGGCTG ATAGGANGCTGTGAAACAGCACTTAATATTCCAGNTATACATGNAATCTATCCTAATGGNGCAGCGGCAAAAGATGG                                                                                                                                                                                                                                                        ]
[+] EMBL CD194616             [                                                                                                                                                                                                                                                                                                                          CCGTCAAATTGTATCAAGGTATCGTCGTGCAAGTTTTCCAAACATTGGTTATAAAAGAGAGCATATTCCCACTACCGTTCTACAGCCTCTCCCAAATTACTCAACAACTTCAATAAACCTTCAAGGAGATACGAATTTCGATAAGATCTCAATTTTAATAAATGACGAACCAGAAATCGAAGCAACAATCCGTCCCATCAAGCCTGGAAGTGAAACTGAAATATCAATCGCAATAAATAATTCTTGTGGTCTAGG AATAGGCTGTATAGGAGGCTGTGAAACAGCACTAAATATTCCAGTTATACATGAAATCTATCCTAATGGTGCAGCGGCAAAAGATGGACGTTTACGCCCAGGGGATCGAATTAGTAAAGTCAATCGAATATCATTAGCCGGTGTGCCATTTTTGGAAGCTATGAATAAACTTCAAATGGCTTATATTAGCAAATCGTCCATGATAAAACTAGATTCAGATGATGAAAATGAAAATATTTCTTTATTAAATCAAGAGCAAAGTTATTTAAATCTCACCATATTTCGACCAACAGAACANAGTCAAAAATGGTATGATCAAGAATTAAATATTGAAT]
[+] EMBL CD194607             [                                                                                                                                                                                                                                                                                                                          CCGTCAAATTGTATCAAGGTATCGTCGTGCAAGTTTTCCAAACATTGGTTATAAAAGAGAGCATATTCCCACTACCGTTCTACAGCCTCTCCCAAATTACTCAACAACTTCAATAAACCTTCAAGGAGATACGAATTTCGATAAGATCTCAATTTTAATAAATGACGAACCAGAAATCGAAGCAACAATCCGTCCCATCAAGCCTGGAAGTGAAACTGAAATATCAATCGCAATAAATAATTCTTGTGGTCTAGG AATAGGCTGTATAGGAGGCTGTGAAACAGCACTAAATATTCCAGTTATACATGAAATCTATCCTAATGGTGCAGCGGCAAAAGATGGACGTTTACGCCCAGGGGATCGAATTAGTAAAGTCAATCGAATATCATTAGCCGGTGTGCCATTTTTGGAAGCTATGAATAAACTTCAAATGGCTTATATTAGCAAATCGTCCATGATANAACTAGATTCAGATGATGAAAA                                                                                                           ]


>consensus_5348#0 AATTAAAATAAACAAAAAATAGTGACTCATGCATCTTACGATACAGTGGTAGATTGGATA CGATCTGCAAAGCATGTTCTTCATGTACAAGTTACACGGTGGGGTTTCAATACTCAAGCA AGTGCAGAAACAAAACCATCAACTAAACGTTTCTCAGATCCATCTGTACTCAATACATTT ACGTCTGTTTTACTTGGTAAAGATAATGAAATTAAAAATTTTCTATCTCCAGTTGATACA TGTCGAGAATTAATTAATACAAAAACTTTAAACGTATTATCCTCAATCGAAAGTGGTGCG AGCTGGTTGGTGCCCCGTCAAATTGTATCAAGGTATCGTCGTGCAAGTTTTCCAAACATT GGTTATAAAAGAGAGCATATTCCCACTACCGTTCTACAGCCTCTCCCAAATTACTCAACA ACTTCAATAAACCTTCAAGGAGATACGAATTTCGATAAGATCTCAATTTTAATAAATGAC GAACCAGAAATCGAAGCAACAATCCGTCCCATCAAGCCTGGAAGTGAAACTGAAATATCA ATCGCAATAAATAATTCTTGTGGTCTAGGAATAGGCTGTATAGGAGGCTGTGAAACAGCA CTAAATATTCCAGTTATACATGAAATCTATCCTAATGGTGCAGCGGCAAAAGATGGACGT TTACGCCCAGGGGATCGAATTAGTAAAGTCAATCGAATATCATTAGCCGGTGTGCCATTT TTGGAAGCTATGAATAAACTTCAAATGGCTTATATTAGCAAATCGTCCATGATAAAACTA GATTCAGATGATGAAAATGAAAATATTTCTTTATTAAATCAAGAGCAAAGTTATTTAAAT CTCACCATATTTCGACCAACAGAACANAGTCAAAAATGGTATGATCAAGAATTAAATATT GAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)