cluster # 5396

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Schistosoma mansoni
cluster # 5396 cluster # 5396 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5396#0 length = 831 sequences # 3

consensusID : consensus_5396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 831
fasta sequence

                              [ATAATCAACATATAAATTCTTTTAATCATTCAAATATCGTGAATAATATATCATCAAATCATCATTCACAATCTCAACAACAATATAATCACCATCATAATCATCCTCAACAACAACCACAACACCAACAGCATATTCACACGAATCAACGTAATCTTCATTCATCGTCGTCATCATCTTCATCTTCGTCATCATCATCTAAACGACAGTCTAATATGAAATCATCTTTATCACCACAATCAAATCATCGTTATACTGAGTCACCA-GTGACAAATGATTCACAAACTCAACAACATTTACTTAATTTAACACAACATCATTTGACAACTACAAAACATCTTTGTTCTTCATCAGCTGAATCGTCGGCAGTTGTAGCATCATCAATGGATTGTTTTATTTCAACTCGGACCACATCAACGACACCACCGAAAACAATGACAGCAGTAAGCAATAGTACTAATACTACTGCTACTACTTCTACCACCAGTACTTCTACTACTACTGCTAATACTACTCAACAACATTCACATATTCATGCAACAATGAATAGTAATAATAGTAGTATCAGTAATAATGGTAATAGTGGTGATGATACTATTCATATCAAACATTCACATAATGAACCAATGTCGTCACAGCTTCTACCGCCTNCAGCTCATCAACATTGTTTACAACCGACTC-AACTAATCATTTGACTGGAT-CCATACATTNGTAGGAGTGATNGATAGNTATGGTAGTAATGATAGTAATAATAATGACAAATTGTCGGAAACATCGAATTCTTCGACTAATAGTCATTCACAACATTATCATCATTCTCAACAACCACGT]

[+] EMBL CD062195             [ATAATCAACATATAAATTCTTTTAATCATTCAAATATCGTGAATAATATATCATCAAATCATCATTCACAATCTCAACAACAATATAATCACCATCATAATCATCCTCAACAACAACCACAACACCAACAGCATATTCACACGAATCAACGTAATCTTCATTCATCGTCGTCATCATCTTCATCTTCGTCATCATCATCTAAACGACAGTCTAATATGAAATCATCTTTATCACCACAATCAAATCATCGTTATACTGAGTCACCA GTGACAAATGATTCACAAACTCAACAACATTTACTTAATTTAACACAACATCATTTGACAACTACAAAACATCTTTGTTCTTCATCAGCTGAATCGTCGGCAGTTGTAGCATCATCAATGGATTGTTTTATTTCAACTCGGACCACATCAACGACACCACCGAAAACAATGACAGCAGTAAGCAATAGTACTAATACTACTGCTACTACTTCTACCACCAGTACTTCTACTACTACTGCTAATACTACTCAACAACATTCACATATTCATGCAACAATGAATAGTAATAATAGTAGTATCAGTAATAATGGTAATAGTGGTGATGATACTATTCATATCAAACATTCACATAATGAACCAATGTCGTCACAGCTTCTACCGCCTNCAGCTCATCAACATTGTTTACAACCGACTC AACTAATCATTTGACTGGAT CCATACATTNGTAGGAGTGATNGATAGNTATGGTAGTAATG                                                                                         ]
[-] EMBL CD064852             [                                                                                                                                                                                                                                                                       CCATGTGACAAATGATTCACAAACTCACCAACATTTACTTAATTTAACACAACATCATTTGACAACTACAAAACATCTTTGTTCTTCATCAGCTGAATCGTCGGCAGTTGTAGCATCATCAATGGATTGTTTTATTTCAACTCGGACCACATCAACGACACCACCGAAAACAATGACAGCAGTAAGCAATAGTACTAATACTACTGCTACTACTTCTACCACCAGTACTTCTACTACTACTGCTAATACTACTCAACAACATTCACATATTCATGCAACAATGAATAGTAATAATAGTAGTATCAGTAATAATGGTAATAGTGGTGATGATACTATTCATATCAAACATTCACATAATGAACCAATGTCGTCACAGCTTCTACCGCCTCCAGCTCATCAACATTGTTTACAACCGACTCAAACTAATCATTTGACTGGATCCCATACATTTGTAGGAGTGATTGATAGTAATGGTAGTAATGATAGTAATAATAATGACAAATTGTCGGAAACATCGAATTCTTCGACTAATAGTCATTCACAACATTATCATCATTCTCAACAACCACGT]
[-] EMBL CD062815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCAGTAAGCAATAGTACTAATACTACTGCTACTACTTCTACCACCAGTACCTCTACTACTACTGCTAATACTACTCAACAACATTCACATATTCATGCAACAATGAATAGTGATAATAGTAGCATCAGTAATAATGGTAATAGTGGTGATGATACTATTCATATCAAGCATTCACATAATGAACCAATGTCGAAACAGCTTCTNCCG CTNC                                                                                                                                                                                     ]




>consensus_5396#0
ATAATCAACATATAAATTCTTTTAATCATTCAAATATCGTGAATAATATATCATCAAATC
ATCATTCACAATCTCAACAACAATATAATCACCATCATAATCATCCTCAACAACAACCAC
AACACCAACAGCATATTCACACGAATCAACGTAATCTTCATTCATCGTCGTCATCATCTT
CATCTTCGTCATCATCATCTAAACGACAGTCTAATATGAAATCATCTTTATCACCACAAT
CAAATCATCGTTATACTGAGTCACCAGTGACAAATGATTCACAAACTCAACAACATTTAC
TTAATTTAACACAACATCATTTGACAACTACAAAACATCTTTGTTCTTCATCAGCTGAAT
CGTCGGCAGTTGTAGCATCATCAATGGATTGTTTTATTTCAACTCGGACCACATCAACGA
CACCACCGAAAACAATGACAGCAGTAAGCAATAGTACTAATACTACTGCTACTACTTCTA
CCACCAGTACTTCTACTACTACTGCTAATACTACTCAACAACATTCACATATTCATGCAA
CAATGAATAGTAATAATAGTAGTATCAGTAATAATGGTAATAGTGGTGATGATACTATTC
ATATCAAACATTCACATAATGAACCAATGTCGTCACAGCTTCTACCGCCTNCAGCTCATC
AACATTGTTTACAACCGACTCAACTAATCATTTGACTGGATCCATACATTNGTAGGAGTG
ATNGATAGNTATGGTAGTAATGATAGTAATAATAATGACAAATTGTCGGAAACATCGAAT
TCTTCGACTAATAGTCATTCACAACATTATCATCATTCTCAACAACCACGT

clustalw multiple alignements is not computed in this case