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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5416#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1133 fasta sequence
[CTCCGGGCCAAAAATTCGGCACGAGGGTGGAAAACGTGCTACTGATAGTGGTAGACAGTTTAAACGTCTTCCATTTCACTGTTGCAGCATCTCATTTCAACCCTTTTTAAACCCATATTGTACAAAAGAGGGGATAGTTTTCGACTTAGAGAATATCCTACCATTTCTGAAAAAGCATGGTATTAATCCTGTTACTGGGTTGAAAATGAAAATGAGTGAATTAATCAAGTTAAATTTTCATCGAAATTCTGATGGGAAATTTCATTGCCCTGTAACATTCAAAGTATTTAATGAAAATACACACATTGTTGCAATTAAGCCAACAGGGAATGTATACTCTTTCGATGCTGTTCAACGTTTGAATTTAAAAGCGAATAATTTCCTTGACTTACTCAATTCTGAATCATTTACAAAAGATGATATCATCACAATACAAGATCCTACACAACTAGAAAAGTTTAATATTTCCGCTTTTTATCATGTGAAAAATAAAGAAGAAGAGCAAAATGAAGGCAATGTAGTAGTAATACGTTCGTTAAATCAAGAAACCAAGGAAACTTTAGCTGAATTACCGAAAGAAATTCCAGTACCAGACTATATGTATTCAA-CTAGGANAAATTCACTAGACACAGGANAAAAGCGTGACGTTTTTAATGCAGCTACTTATTCAACTGGTCGAGCAGCGGCTTCACTTACGTCAACTGTTATGGAAACCAGTAACAAAAATTGAACCGGGTTTCGATTCTCGAAGATGATGTAGTCCGATACAAATATGTGAAAAAGAAAGGCTACGTCAGTTTAGTTACATCACACGGAAAGTTGAACCTTGAGTTGCATTGTGATCTGGTCCCGAAAACGTGTGAAAATTTTCTACGTCATTGTTCTTCAGGTTACTATAATGATACAAGTTTTCATAGACTAATTCGCTACTTTATTGTTCAGGGAGGTGATCCAAGTGGCACTGGGTTTGGTGGTGACTCAGCATGGGGCGGACCTTTTGCAGACGAGTTCGTTCCTAATTTAAGTCATGATACACGTGGTGTTGTATCTATGGCTAATTCTGGACTGAATACTAATCGATCTCAGTTCTTTATTACTTTCCGAAAGTGCAAGCATCTGGATCGCAAGCACAC]
[+] EMBL CD081937 [CTCCGGGCCAAAAATTCGGCACGAGGGTGGAAAACGTGCTACTGATAGTGGTAGACAGTTTAAACGTCTTCCATTTCACTGTTGCAGCATCTCATTTCAACCCTTTTTAAACCCATATTGTACAAAAGAGGGGATAGTTTTCGACTTAGAGAATATCCTACCATTTCTGAAAAAGCATGGTATTAATCCTGTTACTGGGTTGAAAATGAAAATGAGTGAATTAATCAAGTTAAATTTTCATCGAAATTCTGATGGGAAATTTCATTGCCCTGTAACATTCAAAGTATTTAATGAAAATACACACATTGTTGCAATTAAGCCAACAGGGAATGTATACTCTTTCGATGCTGTTCAACGTTTGAATTTAAAAGCGAATAATTTCCTTGACTTACTCAATTCTGAATCATTTACAAAAGATGATATCATCACAATACAAGATCCTACACAACTAGAAAAGTTTAATATTTCCGCTTTTTATCATGTGAAAAATAAAGAAGAAGAGCAAAATGAAGGCAATGTAGTAGTAATACGTTCGTTAAATCAAGAAACCAAGGAAACTTTAGCTGAATTACCGAAAGAAATTCCAGTACCAGACTATATGTATTCAA CTAGGANAAATTCACTAGACACAGGANAAAAGCGTGACGTTTTTAATGCAGCTACTTATTCAACTGGTCGAGCAGCGGCTTCACTTACGTCAACTGTTATGGAAACCAG ]
[+] EMBL CD082370 [ actAAATTCCAGTACCAGACTATATGTATTCAATTTAGGAAAAATTCACTAGACACAGGAAAAAAGCGTGACGTTTTTAATGCAGCTACTTATTCAACTGGTCGAGCAGCGGCTTCACTTACGTCAACTGTTATGG AACCAGTAACAAAAATTGAACCGGGTTTCGATTCTCGAAGATGATGTAGTCCGATACAAATATGTGAAAAAGAAAGGCTACGTCAGTTTAGTTACATCACACGGAAAGTTGAACCTTGAGTTGCATTGTGATCTGGTCCCGAAAACGTGTGAAAATTTTCTACGTCATTGTTCTT ]
[-] EMBL CD062317 [ ATCACACGGAAAGTTGAACCTTGAGTTGCATTGTGATCTGGTCCCGAAAACGTGTGAAAATTTTCTACGTCATTGTTCTTCAGGTTACTATAATGATACAAGTTTTCATAGACTAATTCGCTACTTTATTGTTCAGGGAGGTGATCCAAGTGGCACTGGGTTTGGTGGTGACTCAGCATGGGGCGGACCTTTTGCAGACGAGTTCGTTCCTAATTTAAGTCATGATACACGTGGTGTTGTATCTATGGCTAATTCTGGACTGAATACTAATCGATCTCAGTTCTTTATTACTTTCCGAAAGTGCAAGCATCTGGATCGCAAGCACAC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||