cluster # 5540

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Schistosoma mansoni
cluster # 5540 cluster # 5540 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5540#0 length = 552 sequences # 3

consensusID : consensus_5540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 552
fasta sequence

                              [GTCTAAATATACCCGTGTTCTGTCTTAGCTCATCTCAACTTAAGATGAAAACAATTTTCAAACTATTCGATGTGTAGATGGTATTCACCATAGATTTACCTCACTCGAAGGTACCACTGTGATACAAACGAGATTTGAACTGTTGTTGCATTTTAGGTATGGTACTACTACGAAGTATGAATTGATGACCCTGTTAGGGATCGAATCTATAATCTTGCAGAGAGTAATTAGTTGTTAGACTGCTGAGTTAGGAGGTTATGAGTTATATTTCCAACTTCATCAGACAAAAATCAATT-AAAACTGCTTTATCATGTAAAAGAGTATCAAATTAAATTACTTGTTA-TAAAGTGAGTTATATAATCGTAAACCTTCTAATGATCCACAAATAGACAATAAATCTTCTTTAGCTAGGCGAAGTATATCACAACCTAATGAGATAGGGGAAAAAACAAAATTTAAAAAAATCGAATCTATTTCAAACCAAGAAAAGAAAAAACTGAAGGAAAACATTTACGAAAATCTCAGGAATTGAATGTGTTATATCTTGTGGTC]

[+] EMBL CD110917             [GTCTAAATATACCCGTGTTCTGTCTTAGCTCATCTCAACTTAAGATGAAAACAATTTTCAAACTATTCGATGTGTAGATGGTATTCACCATAGATTTACCTCACTCGAAGGTACCACTGTGATACAAACGAGATTTGAACTGTTGTTGCATTTTAGGTATGGTACTACTACGAAGTATGAATTGATGACCCTGTTAGGGATCGAATCTATAATCTTGCAGAGAGTAATTAGTTGTTAGACTGCTGAGTTAGGAGGTTATGAGTTATATTTCCAACTTCATCAGACAAAAATCAATTGAAAACTGCTTTATCATGTAAAAGAGTATCACATTAAATTACTTGTGATTGAAGTGAGTTATATAATCGTAAACCTTCTAATGATCCACAAATAGACAATAAATCTTCTTTAGCTAGGCGAAGTATATCACAACCTAATGAGATAGGGGAAAAAACAAAATTTAAAAAAATCGAATCTATTTCAAACCAAGAAAAGA                                                             ]
[+] EMBL CD111017             [GTC AAATATACCC TGTTCT TCTTAGCTCATCTCAACTTAAGATGAAAACAATTTTCAAACTATTCGATGTGTAGATGGTATTCACCATAGATTTACCTCACTC AAGGTACCACTGT ATTCAACCGAGATTTGAACTGTTGTTTCATTTTA GTATGGTACTACTACGAAGTATGAATTGATGACCCTGTTAGGGATCGAATCTATAATCTTGCAGAGAGTAATTAGTTGTTAGACTGCTGAGTTAGGAGGTTATGAGTTATATTTCCAACTTCATCAGACAAAAATCAATT AAAACTGCTTTATCATGTAAAAGAGTATCAAATTAAATTACTTGTTA TAAAGTGAGTTATATAATCGTAAACCTTCTAATGATCCACAAATAGACCATAAATCTTCTTTAGCTAGGCGAAGTATAT                                                                                                                                  ]
[-] EMBL CD111481             [                                                                                                                                                                                ATGAATTGATGACCCTGTTAGGGATCGAATCTATAATCTGGCAGAGAGTAATTAGTTGTTAGACTGCTGAGTTAGGAGGTTATGAGTTATATTTCCAACTTCATCAGACAAAAATCAATT AAAACTGCTTTATCATGTAAAAGAGTATCAAATTAAATTACTTGTTA TAAAGTGAGTTATATAATCGTAAACCTTCTAATGATCCACAAATAGACAATAAATCTTCTTTAGCTAGGCGAAGTATATCACAACCTAATGAGATAGGGGAAAAAACAAAATTTAAAAAAATCGAATCTATTTCAAACCAAGAAAAGAAAAAACTGAAGGAAAACATTTACGAAAATCTCAGGAATTGAATGTGTTATATCTTGTGGTC]




>consensus_5540#0
GTCTAAATATACCCGTGTTCTGTCTTAGCTCATCTCAACTTAAGATGAAAACAATTTTCA
AACTATTCGATGTGTAGATGGTATTCACCATAGATTTACCTCACTCGAAGGTACCACTGT
GATACAAACGAGATTTGAACTGTTGTTGCATTTTAGGTATGGTACTACTACGAAGTATGA
ATTGATGACCCTGTTAGGGATCGAATCTATAATCTTGCAGAGAGTAATTAGTTGTTAGAC
TGCTGAGTTAGGAGGTTATGAGTTATATTTCCAACTTCATCAGACAAAAATCAATTAAAA
CTGCTTTATCATGTAAAAGAGTATCAAATTAAATTACTTGTTATAAAGTGAGTTATATAA
TCGTAAACCTTCTAATGATCCACAAATAGACAATAAATCTTCTTTAGCTAGGCGAAGTAT
ATCACAACCTAATGAGATAGGGGAAAAAACAAAATTTAAAAAAATCGAATCTATTTCAAA
CCAAGAAAAGAAAAAACTGAAGGAAAACATTTACGAAAATCTCAGGAATTGAATGTGTTA
TATCTTGTGGTC

clustalw multiple alignements is not computed in this case