Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5552 cluster # 5552       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5552#0 length = 772 sequences # 3  
consensusID : consensus_5552#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 772
fasta sequence 
                              [AACAACAGGGCTAAGAACTGTTGTTGAGGTATGTTCACCGATTGGTAAACACGAGGATGTGGTAGTATGGCCAGATGAGTTGCATTCTGAAACTACTTTAGGAGAGCTTAGTGATACACATGAAGCATGAACTGTATCCTTCAGAAGTAAAAGATTTGAATTAAAAACCTGATCATCATGACTTTGACGAGTTACATAATCGTCCATATGCACAGGCGGTGTATTTGGTGGGGGAAAGTGAGAAACTGACGCGAGAGAAGAATTTGTACGTTCATTCTCGATAGAATGAGATTCGCAGGATAAATTATGGTGAGGCATATCGGACGTATGTCTACCATCTAAATGTGTCCGAACAGGGGAATGAGATCGGAATGTCAGAGGAGAGCTGCATGGAGTGGAAACACTGGAGGATAACAAATAACTAGTAGACACAGACTGTGTTGTGGGTGTTGGGATTAGGATTGCGAGAGGGTCATCGCTATGTGCATAGGGCGTTCTTGANCAACTATGACTCGAAACTAACATAGGAACACTATCTACTGAGTGAATGACCTGAGTTTGATCGCCAACACCCACTGACATTGGTCTGNCAGTGATTGTGTCAATAAGCCGACTACTTCCTGAATCCAGGTGGAGTGTTAAGTCCAGAGGAAGAGCGAACTGACGGTGAACCTTGATGAACCCTGGAGTCGGCAGCCGCAACAGCGGCTGCTGCTGCCAAGAGTGAACGTACATCTTCATCATCATCGACTAAGGGTGACACATCAGGAGA]

[+] EMBL CD110812             [AACAACAGGGCTAAGAACTGTTGTTGAGGTATGTTCACCGATTGGTAAACACGAGGATGTGGTAGTATGGCCAGATGAGTTGCATTCTGAAACTACTTTAGGAGAGCTTAGTGATACACATGAAGCATGAACTGTATCCTTCAGAAGTAAAAGATTTGAATTAAAAACCTGATCATCATGACTTTGACGAGTTACATAATCGTCCATATGCACAGGCGGTGTATTTGGTGGGGGAAAGTGAGAAACTGACGCGAGAGAAGAATTTGTACGTTCATTCTCGATAGAATGAGATTCGCAGGATAAATTATGGTGAGGCATATCGGACGTATGTCTACCATCTAAATGTGTCCGAACAGGGGAATGAGATCGGAATGTCAGAGGAGAGCTGCATGGAGTGGAAACACTGGAGGATAACAAATAACTAGTAGACACAGACTGTGTTGTGGGTGTTGGGATTAGGATTGCGAGAGGGTCATCGCTATGTGCATAGGGCGTTCTTGANCAACTATGACTCGAAACTAACATAGGAACACTATCTACTGAGTGAATGACCTGAGTTTGATCGCCAACACCCACTGACATTGGTCTGNCAGTGATTGTGTCAATAAGCCGACTACTTCCTGAATCCAGGTGGAGTGTTAAG                                                                                                                                 ]
[+] EMBL CD111785             [AACAACAGGGCTAGGAACTGTTGTTGAGGGATGTTCACCGATTGGTAAACGCGAGGAGGTGGAAGTATGGCCAGATGAGTTGCATTCTGAAACTACTTTAGGAGAGCTTAGTGATACACATGAAGCATGAACTGTATCCTTCAGAAGTAAAAGATTTGAATTATAAACCTGATCATCATGACTTTGACGAGTTACATAATCGTCCATATGCACAGGCGGTGTATTTGGTGGGGGAAAGTGAGAAACTGACGCGAGAGAAGAAATTGTACGTTCATTCTCGATAGAATGAGATTCGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD118376             [                                                                                                                                                                                                                                                                                                                                                                                                        GAGTGGAAACACTGGAGGATAACAAATAACTAGTAGACACAGACTGTGTTGTGGGTGTTGGGATTAGGATTGCGAGAGGGTCATCGCTATGTACATAGGGCGTTCTTGACAAACTATGACTCGAAACTAACATAGGAACACTATCTACTGAGTGAATGACCTGAGTTTGATCGCAAACACCAACTGACATTGGTCTGCAAGTGATTGTGTCCATAAGTCGACTACTTCTTGAAT CAGGTGGAGTGTTAAGTCCAGAGGAAGAGCGAACTGACGGTGAACCTTGATGAACCCTGGAGTCGGCAGCCGCAACAGCGGCTGCTGCTGCCAAGAGTGAACGTACATCTTCATCATCATCGACTAAGGGTGACACATCAGGAGA]




>consensus_5552#0
AACAACAGGGCTAAGAACTGTTGTTGAGGTATGTTCACCGATTGGTAAACACGAGGATGT
GGTAGTATGGCCAGATGAGTTGCATTCTGAAACTACTTTAGGAGAGCTTAGTGATACACA
TGAAGCATGAACTGTATCCTTCAGAAGTAAAAGATTTGAATTAAAAACCTGATCATCATG
ACTTTGACGAGTTACATAATCGTCCATATGCACAGGCGGTGTATTTGGTGGGGGAAAGTG
AGAAACTGACGCGAGAGAAGAATTTGTACGTTCATTCTCGATAGAATGAGATTCGCAGGA
TAAATTATGGTGAGGCATATCGGACGTATGTCTACCATCTAAATGTGTCCGAACAGGGGA
ATGAGATCGGAATGTCAGAGGAGAGCTGCATGGAGTGGAAACACTGGAGGATAACAAATA
ACTAGTAGACACAGACTGTGTTGTGGGTGTTGGGATTAGGATTGCGAGAGGGTCATCGCT
ATGTGCATAGGGCGTTCTTGANCAACTATGACTCGAAACTAACATAGGAACACTATCTAC
TGAGTGAATGACCTGAGTTTGATCGCCAACACCCACTGACATTGGTCTGNCAGTGATTGT
GTCAATAAGCCGACTACTTCCTGAATCCAGGTGGAGTGTTAAGTCCAGAGGAAGAGCGAA
CTGACGGTGAACCTTGATGAACCCTGGAGTCGGCAGCCGCAACAGCGGCTGCTGCTGCCA
AGAGTGAACGTACATCTTCATCATCATCGACTAAGGGTGACACATCAGGAGA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)