These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_568#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 949 fasta sequence [CTCGCGGCCAANAATTTGGCACGAGGCGAGACATCGCTTAAAAGCCTATTTATGTAGAACAGATATCAATACTGTTTCACAACAACGTACTTTAATCTCTACGGAAGATCGTAGCCAGTTTTGTATATTTGCAATGCTTGAAGCAAGTCATTGGTTTGCTGCTGGACGTATTCAAGCTGCAGATGAAGTTTTATCAAAGAATATACTGCCCGAGCTTATTTTACATACAAATATTTCACCTTATTCAGCTTTTCAGCTAAAATTCGAATCAGTATACTCTGAACTAGGTCATCGTATTGCTCACTTGCTTGAGCCTTATAATTCCCTAGCAGAAAATTGTTTACCAAGTGATTTTCATTCAGGTGTTGGTGTTTATCGATCTTTTGGTGAACTACTTTGCCTAGTAGATGAACTTACAAATTTTTGCAAACAATCTTCACTACTAGACAGTGTATTGTATAGTCCTAGCAAGAAAAAACTGAAAGAAGATACTGATTTAAATAAACTAGATAATTTAGCATCAATTCTATCGAAATTAAAATCAAAAGTTCCCAGTGTAACAGAAGAGATTAATTTAATGAATATTAATTCATTTATTGAGAAAGTAGTACGCACAGAAATGGCTGCCGTTTGCATACATTTAACTTCTGCGTTTCTTGCAGCTAGCTGTTTGGAAAACATGAACGATGAACAAAAATTCATCGAC-AATGAAATGATCAAAAATCANGAACAAGGAAAACGT--AACTATCTAGAGCATCAACTTGTCTGTATGACTAAATTANGCTTGCCAGCAGACTATCGATTGAAGGAAC-TCGTGCAGNTGCAGAAATTAAAGTGTCTTTAGGGGTNNGTGT-AGC-AG-TGT-AACTGA-CACCTNCA-GNTGT-ACTTTTT--AAAC-ATGCAC--TTTACGT-TTNACA-TCT-ACTG--TTTAT-ATGT--AAAG-ATC-AGATAACCCACACTG] [+] EMBL CD081111 [CTCGCGGCCAANAATTTGGCACGAGGCGAGACATCGCTTAAAAGCCTATTTATGTAGAACAGATATCAATACTGTTTCACAACAACGTACTTTAATCTCTACGGAAGATCGTAGCCAGTTTTGTATATTTGCAATGCTTGAAGCAAGTCATTGGTTTGCTGCTGGACGTATTCAAGCTGCAGATGAAGTTTTATCAAAGAATATACTGCCCGAGCTTATTTTACATACAAATATTTCACCTTATTCAGCTTTTCAGCTAAAATTCGAATCAGTATACTCTGAACTAGGTCATCGTATTGCTCACTTGCTTGAGCCTTATAATTCCCTAGCAGAAAATTGTTTACCAAGTGATTTTCATTCAGGTGTTGGTGTTTATCGATCTTTTGGTGAACTACTTTGCCTAGTAGATGAACTTACAAATTTTTGCAAACAATCTTCACTACTAGACAGTGTATTGTATAGTCCTAGCAAGAAAAAACTGAAAGAAGATACTGATTTAAATAAACTAGATAATTTAGCATCAATTCTATCGAAATTAAAATCAAAAGTTCCCAGTGTAACAGAAGAGATTAATTTAATGAATATTAATTCATTTATTGAGAAAGTAGTACGCACAGAAATGGCTGCCGTTTGCATACATTTAACTTCTGCGTTTCTTGCAGCTAGCTGTTTGGAAAACATGAACGATGAACAAAAATTCATCGAC AATGAAATGATCAAAAATCANGAACAAGGAAAACGT AACTATCTAGAGCATCAACTTGTCTGTATGACTAAATTANGCTTGCCAGCAGACTATCGATTGAAGGAAC TCGTGCAGNTGCAGAAATTAAAGTGTCTTTAGGGGTNNGTGT AGC AG TGT AACTGA CACCTNCA GNTGT ACTTTTT AAAC ATGCAC TTTACGT TTNACA TCT ACTG TTTAT ATGT AAAG ATC AGATAACCC ] [-] EMBL CD074934 [ CAGAAAATTGTTTACCAAGTGATTTTCATTCAGGTGTTGGTGTTTATCGATCTTTTGGTGAACTACTTTGCCTAGTAGATGAACTTACAAATTTTTGCAAACAATCTTCACTACTAGACAGTGTATTGTATAGTCCTAGCAAGAAAAAACTGAAAGAAGATACTGATTTAAATAAACTAGATAATTTAGCATCAATTCTATCGAAATTAAAATCAAAAGTTCCCAGTGTAACAGAAGAGATTAATTTAATGAATATTAATTCATTTATTGAGAAAGTAGTACGCACAGAAATGGCTGCCGTTTGCATACATTTAACTTCTGCGTTTCTTGCAGCTAGCTGTTTGGAAAACATGAACGATGAAC AAAATTCATCGACAAATGAAATGATCAAAAATCAGGAACAAGG AACGTTAAACTATCTAGAGCATCAACTTGTCTGTATGACTAAATTAGGCTTGCCAGCAGACTATCGATTGAAGGAACTTCGTGCAGTTGCAGAAATTAAGTTGTCTTTAGGGGT TGTGTAAGCAAGTTGTAAACTGACCACCTCCAGGTTGTAACTTTTTTAAAACAATGCACTTTTTACGTCTTTACATTCTAACTGTTTTTATAATGTAAAAAGAATCAAGATAAAACACACTG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||