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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5680 cluster # 5680       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5680#0 length = 1087 sequences # 3  
consensusID : consensus_5680#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1087
fasta sequence 
                              [AATTCGGCACGCGGAGTTGTTATAGGGGTCAACANTGTGTAAAAAAGCAAGAAGTATAAGAATTTGGATGGGATTTTTCCATAAACATTATTTCTTGTTTTGTTGCTTGGAGTTTTCATCACAGGAGAATCATCAGTTCATCCCTAAAGAGAACCGAATTTATTTAGTCTTATTGTTAAGATGCACTTACTATTTCTTTTTAGCCTTTTGCACCTACAGATAACATGTCATCCGACGGCACTAATAAATCATCTGACGATAAGAAAAAGTTACCCGAGGCCATTAAAAAGTCATACTCGTCTAGAGTCGATTTTATGATTCAAGAAGCTTCTAAACTTGAAGTTTCTGGCATTTCACAATTGTATAATTGTGTTCGACAACGTATGATGGATGTTGGTTTACTAGAGGACAATCGAAATCTTAGAAATTCCATTGATGCTCCATGGTTAGATGATGAGGCTATACAATTAAAATTATGCTATCAAGAAGCTGTCTCTCTTTGGACAACATGGCCAACATCTGCTTGTGCTGAACGAATTAAATCAATTCGTCAACAATTAAATACAAAATTACTTGATTTACGTCAAAAATGGGAAGAGAAAATCAATAATTGTCGTACAATGGATAGTAGAAATGCTGAAAAAGTTTTAAAATTAAATGCAGCACAATACAAAGAATTATTATTGTTTGCATCTGGTCACGAACAACAACACCAACAAAATAATGATCCACCATATTGTTCAATGCCTGCTTCCTCTTCTTCAAACAAAAGATCCCAACATAATTATCATCCATATGATTTGAATCGAAATCACCATTATCATCATCATCGTCAACGTCATCATCATTATCAAGATTCGTTAAATATTCCACGGACTATGATGAAAACATCTGATTGTCAACCATTTAGTTATTATATTCCANATGATATCAATATGACACCTCANNGAT-ATCGACGTATTCATGGGATANGATATCANAATTATTTCCATCAATCATAATACTGGGTATATATATATATATATATATATATTAAAAACCCGCTGTAAATAG-TTATTCCCCTA-TTCATAGNTTGGNTATATATTTT]

[+] EMBL CD081757             [AATTCGGCACGCGGAGTTGTTATAGGGGTCAACANTGTGTAAAAAAGCAAGAAGTATAAGAATTTGGATGGGATTTTTCCATAAACATTATTTCTTGTTTTGTTGCTTGGAGTTTTCATCACAGGAGAATCATCAGTTCATCCCTAAAGAGAACCGAATTTATTTAGTCTTATTGTTAAGATGCACTTACTATTTCTTTTTAGCCTTTTGCACCTACAGATAACATGTCATCCGACGGCACTAATAAATCATCTGACGATAAGAAAAAGTTACCCGAGGCCATTAAAAAGTCATACTCGTCTAGAGTCGATTTTATGATTCAAGAAGCTTCTAAACTTGAAGTTTCTGGCATTTCACAATTGTATAATTGTGTTCGACAACGTATGATGGATGTTGGTTTACTAGAGGACAATCGAAATCTTAGAAATTCCATTGATGCTCCATGGTTAGATGATGAGGCTATACAATTAAAATTATGCTATCAAGAAGCTGTCTCTCTTTGGACAACATGGCCAACATCTGCTTGTGCTGAACGAATTAAATCAATTCGTCAACAATTAAATACAAAATTACTTGATTTACGTCAAAAATGGGAAGAGAAAATCAATAATTGTCGTACAATGGATAGTAGAAATGCTGAAAAAGTTTTAAAATTAAATGCAGCACAATACAAAGAATTATTATTGTTTGCATCTGGTCACGAACAACAACACCAACAAAATAATGATCCACCATATTGTTCAATGCCTGCTTCCTCTTCTTCAAACAAAAGATCCCAACATAATTATCATCCATATGATTTGAATCGAAATCACCATTATCATCATCATCGTCAACGTCATCATCATTATCAAGATTCGTTAAATATTCCACGGACTATGATGAAAACATCTGATTGTCAACCATTTAGTTATTATATTCCANATGATATCAATATGACACCTCANNGAT ATCGACGTATTCATGGGATANGATATCANAATTATTTCCATCAATCATAATACTGGGTATATATATATATATATATATATATTAAAAACCCGCTGTAAATAG TTATTCCCCTA TTCATAGNTTGGNTATATATTT ]
[+] EMBL CD112929             [                                                                                                                                                                                                                                              CACTAATAAATCATCTGACGATAAGAAAAAGTTACCCGAGGCCATTAAAAAGTCATACTCGTCTTGAGTCGATTTTATGATTCAAGAAGCTTCTAAACTTGAAGTTTCTGGCATTTCACAATTGTATAATTGTGTTCGACAACGTATGATGGATGTTGGTTTACTAGAGGACAATCGAAATCTTGGAAATTCCATTGATGCTCCATGGTTAGATGATGAGGCTATACAATTAAAATTATGCTATCAAGAAGCTGTCTCTCTTTGGACAACATGGCCCACATCTGGTTGTGCTGAACGAATTAAATCAATTCGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD075490             [                                                                                                                                                                                                                                                                                                                           TGATTCAAGAAGCTTCTAAACTTGAAGTTTCTGGCATTTCACAATTGTATAATTGTGTTCGACAACGTATGATGGATGTTGGTTTACTAGAGGACAATCGAAATCTTAGAAATTCCATTGATGCTCCATGGTTAGATGATGAGGCTATACAATTAAAATTATGCTATCAAGAAGCTGTCTCTCTTTGGACAACATGGCCAACATCTGCTTGTGCTGAACGAATTAAATCAATTCGTCAACAATTAAATACAAAATTACTTGATTTACGTCAAAAATGGGAAGAGAAAATCAATAATTGTCGTACAATGGATAGTAGAAATGCTGAAAAAGTTTTAAAATTAAATGCAGCCCAATACAAAGAATTATTATTGTTTGCATCTGGTCACGAACAACAACACCAACAAAATAATGATCCCCCATATTGTTCAATGCCTGCTTCCTCTTCTTCAAACAAAAGATCCCAACATAATTATCATCCATATGATTTGAATCGAAATCACCATTATCATCATCATCGTCAACGTCATCATCATTATCAAGATTCGTTAAATATTCCACGGACTATGATGAAACAATCTGATTGTCAACCATTTAGTTATTATATTCCAAATGATATCAATATGACACCTCA AGATAATCGACGTATTCATGGGATAGAATATCAAAATTATTTCCATCAATCAGAATACTGTTTATATATATATATAAAAATATATATTAAATA CCGCTGTAAATAGTTTATT CCCTATTTCATAGTTTGGTTATATATTTT]




>consensus_5680#0
AATTCGGCACGCGGAGTTGTTATAGGGGTCAACANTGTGTAAAAAAGCAAGAAGTATAAG
AATTTGGATGGGATTTTTCCATAAACATTATTTCTTGTTTTGTTGCTTGGAGTTTTCATC
ACAGGAGAATCATCAGTTCATCCCTAAAGAGAACCGAATTTATTTAGTCTTATTGTTAAG
ATGCACTTACTATTTCTTTTTAGCCTTTTGCACCTACAGATAACATGTCATCCGACGGCA
CTAATAAATCATCTGACGATAAGAAAAAGTTACCCGAGGCCATTAAAAAGTCATACTCGT
CTAGAGTCGATTTTATGATTCAAGAAGCTTCTAAACTTGAAGTTTCTGGCATTTCACAAT
TGTATAATTGTGTTCGACAACGTATGATGGATGTTGGTTTACTAGAGGACAATCGAAATC
TTAGAAATTCCATTGATGCTCCATGGTTAGATGATGAGGCTATACAATTAAAATTATGCT
ATCAAGAAGCTGTCTCTCTTTGGACAACATGGCCAACATCTGCTTGTGCTGAACGAATTA
AATCAATTCGTCAACAATTAAATACAAAATTACTTGATTTACGTCAAAAATGGGAAGAGA
AAATCAATAATTGTCGTACAATGGATAGTAGAAATGCTGAAAAAGTTTTAAAATTAAATG
CAGCACAATACAAAGAATTATTATTGTTTGCATCTGGTCACGAACAACAACACCAACAAA
ATAATGATCCACCATATTGTTCAATGCCTGCTTCCTCTTCTTCAAACAAAAGATCCCAAC
ATAATTATCATCCATATGATTTGAATCGAAATCACCATTATCATCATCATCGTCAACGTC
ATCATCATTATCAAGATTCGTTAAATATTCCACGGACTATGATGAAAACATCTGATTGTC
AACCATTTAGTTATTATATTCCANATGATATCAATATGACACCTCANNGATATCGACGTA
TTCATGGGATANGATATCANAATTATTTCCATCAATCATAATACTGGGTATATATATATA
TATATATATATATTAAAAACCCGCTGTAAATAGTTATTCCCCTATTCATAGNTTGGNTAT
ATATTTT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)