Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5767 cluster # 5767       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5767#0 length = 927 sequences # 3  
consensusID : consensus_5767#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 927
fasta sequence 
                              [GTCACATATAATCTAGACAGTAAACAAGTATACTTTGACCATATCGAGAATGAGTTAGTATGTGCGAGAAAAACAGCTCTTTACATAATTTGTAGTTCCAGGACACTAAAAGTGTGTGTACATATTTGTATTTATTAATCAGGTGATCGAACATAAATATAAACCTTGGTTTTTGGAAATGACTATTCGCTCCATCGTTTAACGAAATGTAGTTTTCCAACCAAGATCTTGGGTCATCATAGAACATATCAGCCTCATCGATATAACGATAACTATCTGATATCAGTTTTGTCAAATCTGGATTACATGACAGTTGTTTAAAAGAAATGTTTCGATGTAGATATCCTACTGATGGGACCGTATGACACGGCATCAAGTTCAGAGCAGTTACAACTTCATTTCTAAGTTGATTTTTCAAGATTTGTTGGTCCAAAAATTTTATTGAATCAAGTCCACCACGTTGATGCACTAAACATGTATATAGTGCCAATGGAACATGCGTCAAAATTATGAATGACACCAAATACTGGCGTCGGGTAATCTGACTGTGTAAAATTTTTAGTTTGAGTCCGTAACGAACGAACCACACTGATATAATACCAGAGAAATACATAGCTAGCGGGATTGATGGGAAGATAAATCTGAATTCTTTGTGCGGAAGGAAACTATNACATATTATAATCCATATCATGNCAATAATACACAAACCACATGGATCACGAAACATCTGATTGCTGGAGTTGTTTGAATAGTCTATCTTCTTTCTCTCTTCCGTGAGATCTCTTACAAAACCTGGACCATATTTAAAATACATAACAATAAAGGTTACCACCAAAGGTGTTTGCGTTAACAACATAGCCAGAAATCCTTGGGATAAGTACCAGTGCCAAGGCTGAACGGCATAAAATCGTGATCCTCCAGAAAAAA]

[+] EMBL CD074446             [GTCACATATAATCTAGACAGTAAACAAGTATACTTTGACCATATCGAGAATGAGTTAGTATGTGCGAGAAAAACAGCTCTTTACATAATTTGTAGTTCCAGGACACTAAAAGTGTGTGTACATATTTGTATTTATTAATCAGGTGATCGAACATAAATATAAACCTTGGTTTTTGGAAATGACTATTCGCTCCATCGTTTAACGAAATGTAGTTTTCCAACCAAGATCTTGGGTCATCATAGAACATATCAGCCTCATCGATATAACGATAACTATCTGATATCAGTTTTGTCAAATCTGGATTACATGACAGTTGTTTAAAAGAAATGTTTCGATGTAGATATCCTACTGATGGGACCGTATGACACGGCATCAAGTTCAGAGCAGTTACAACTTCATTTCTAAGTTGATTTTTCAAGATTTGTTGGTCCAAAAATTTTATTGAATCAAGTCCACCACGTTGATGCACTAAACATGTATATAGTGCCAATGGAACATGCGTCAAAATTATGAATGACACCAAATACTGGCGTCGGGTAATCTGACTGTGTAAAATTTTTAGTTTGAGTCCGTAACGAACGAACCACACTGATATAATACCAGAGAAATACATAGCTAGCGGGATTGATGGGAAGATAAATCTGAATTCTTTGTGCGGAAGGAAACTATNACATATTATAATCCATATCATGN                                                                                                                                                                                                                                          ]
[+] EMBL CD074264             [GTCACATATAATCTAGACAGTAAACAAGTATACTTTGACCATATCGAGAATGAGTTAGTATGTGCGAGAAAAACAGCTCTTTACATAATTTGTAGTTCCAGGACACTAAAAGTGTGTGTACATATTTGTATTTATTAATCAGGTGATCGAACATAAATATAAACCTTGGTTTTTGGAAATGACTATTCGCTCCATCGTTTAACGAAATGTAGTTTTCCAACCAAGATCTTGGGTCATCATAGAACATATCAGCCTCATCGATATAACGATAACTATCTGATATCAGTTTTGTCAAATCTGGATTACATGACAGTTGTTTAAAAGAAATGTTTCGATGTAGATATCCTACTGATGGGACCGTATGACACGGCATCAAGTTCAGAGCAGTTACAACTTCATTTCTAAGTTGATTTTTCAAGATTTGTTGGTCCAAAAATTTTATTGAATCAAGTCCACCACGTTGATGCACTAAACATGTATATAGTGCCAATGGAACATGCGTCAAAATTATGAATGACACCAAATACTGGCGTCGGGTAATCTGACTGTGTAAAATTTTTAGTTTGAGTCCGTAACGAACGAACCACACTGATATAATACCAGAGAAATACATAGCTAGCGGGATTGATGGGAAGATAAATCTG                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD080347             [                                                                                                                                                                                                                                                            CCTCATCGATATAACGATAACTATCTGATATCAGTTNTGTCAAATCTGGATTACATGACAGTTGTTTAAAAGAAATGTTTCGATGTAGATATCCTACTGATGGGACCGTATGACACGGCATCAAGTTCAGAGCAGTTACAACTTCATTTCTAAGTTGATTTTTCAAGATTTGTTGGTCCAAAAATTTTATTGAATCAAGTCCACCACGTTGATGCACTAAACATGTATATAGTGCCAATGGAACATGCGTCAAAATTATGAATGACACCAAATACTGGCGTCGGGTAATCTGACTGTGTAAAATTTTTAGTTTGAGTCCGTAACGAACGAACCACACTGATATAATACCAGAGAAATACATAGCTAGCGGGATTGATGGGAAGATAAATCTGAATTCTTTGTGCGGAAGGAAACTATAACATATTATAATCCATATCATGACAATAATACACAAACCACATGGATCACGAAACATCTGATTGCTGGAGTTGTTTGAATAGTCTATCTTCTTTCTCTCTTCCGTGAGATCTCTTACAAAACCTGGACCATATTTAAAATACATAACAATAAAGGTTACCACCAAAGGTGTTTGCGTTAACAACATAGCCAGAAATCCTTGGGATAAGTACCAGTGCCAAGGCTGAACGGCATAAAATCGTGATCCTCCAGAAAAAA]




>consensus_5767#0
GTCACATATAATCTAGACAGTAAACAAGTATACTTTGACCATATCGAGAATGAGTTAGTA
TGTGCGAGAAAAACAGCTCTTTACATAATTTGTAGTTCCAGGACACTAAAAGTGTGTGTA
CATATTTGTATTTATTAATCAGGTGATCGAACATAAATATAAACCTTGGTTTTTGGAAAT
GACTATTCGCTCCATCGTTTAACGAAATGTAGTTTTCCAACCAAGATCTTGGGTCATCAT
AGAACATATCAGCCTCATCGATATAACGATAACTATCTGATATCAGTTTTGTCAAATCTG
GATTACATGACAGTTGTTTAAAAGAAATGTTTCGATGTAGATATCCTACTGATGGGACCG
TATGACACGGCATCAAGTTCAGAGCAGTTACAACTTCATTTCTAAGTTGATTTTTCAAGA
TTTGTTGGTCCAAAAATTTTATTGAATCAAGTCCACCACGTTGATGCACTAAACATGTAT
ATAGTGCCAATGGAACATGCGTCAAAATTATGAATGACACCAAATACTGGCGTCGGGTAA
TCTGACTGTGTAAAATTTTTAGTTTGAGTCCGTAACGAACGAACCACACTGATATAATAC
CAGAGAAATACATAGCTAGCGGGATTGATGGGAAGATAAATCTGAATTCTTTGTGCGGAA
GGAAACTATNACATATTATAATCCATATCATGNCAATAATACACAAACCACATGGATCAC
GAAACATCTGATTGCTGGAGTTGTTTGAATAGTCTATCTTCTTTCTCTCTTCCGTGAGAT
CTCTTACAAAACCTGGACCATATTTAAAATACATAACAATAAAGGTTACCACCAAAGGTG
TTTGCGTTAACAACATAGCCAGAAATCCTTGGGATAAGTACCAGTGCCAAGGCTGAACGG
CATAAAATCGTGATCCTCCAGAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)