Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5810 cluster # 5810       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5810#0 length = 338 sequences # 3  
consensusID : consensus_5810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 338
fasta sequence 
                              [GTTTACCCGCAGTACACCCCCAGATTGAAAATTTCTAACTTCCTATTGCTGAGTCAGATTTTCAAAGGTAATCAACTTCTGGCGAAAAAAATACGTCAAGTGAGCTTCAACTTAAAAATTTTCATATACACAAACTATGACTTGATCGATGCATTTGGCTACACATGTCAGCTATCGACTGATAGAAGCTTATCATACATTTAGTTAGGTTAAACACCTCACTGCATATATTTCTTAGTCAATAACACTGCTCTTTCGGACAAGATAAAGTAAGATGACACAAAAAAATTTGAAATTGAGAATAATTTTCACGGTTAATTGTCACCGAATCTTTAAAA]

[+] EMBL CD123172             [GTTTACCCGCAACACACCCCCACATTGAAAATTTCTAACTTCCTATTGCTGACTCATATTTTCACACGTAATCAACTTCTGGCGAACAAAATACCTCAAGTGAGCTTGAACTTAAAAATCTTCATATACACAAACTATGACTTGATCGATGCATTTGGCTACACATGTCATCTATCTACTGATACAAACTTATCATACATTTACTTTTGTTAAACACCTCACTGCATATATTTCTTAGTCAATAACACTGCTCTTTCGGACAAGATAAAGTAAGATGACACAAAAAAATTTGAAATTGAGAATAATTTTCACGGTTAATTGTCACCGAATCTTTAAAA]
[+] EMBL CD122792             [GTTTACCCGCAGTACACCCCCAGATCGAAAATTTCTAACTTCCTATTGCTGAGTCAGATTTTCAAAGGTAATCAACTTCTGGCGAAAAAAATACGTCAAGTGAGCTTCAACTTAAAAATTTTCATATACACAAACTATGACTTGATCGATGCATTTGGCTACACATGTCAGCTATCGACTGATAGAAGCTTATCATACATTTAGTTAGGTTAAACACCTCACTGCATATATTTCTTAGTCAATAACACTGCTCTTTCGGACAAGATAAAGTAAAATGACACAAAAAAATTTGAAATTGAGAATAATTTTCACGGTTAATTGTCACCGAATCTTTAA  ]
[-] EMBL CD123143             [ TTGACCCGCAGTACACCCCCAGATTGAAAATTTCTAACTTCCTATTGCTGAGCCAGATTTTCAAAGGT ATCACCTTCTGGCGAAAAAAATACGTCAAGTGAGCTTCAACTTAAAAATTTTCATATACACAAACTATGACTTGATCGATGCATTTGGGTACACATGTCAGCTATCGACTGATAGAAGCTTATCATACATTTAGTTAGGTTAAACACCTCACTGCATATATTTCTTAGTCAATAACACTGCTCTTTCGGACAAGATAAAGTAAGATGACACAAAAAAATTTGAAATTGAGAATAATTTTCACGGTTAATTGTCACCGAATCTTTAAA ]




>consensus_5810#0
GTTTACCCGCAGTACACCCCCAGATTGAAAATTTCTAACTTCCTATTGCTGAGTCAGATT
TTCAAAGGTAATCAACTTCTGGCGAAAAAAATACGTCAAGTGAGCTTCAACTTAAAAATT
TTCATATACACAAACTATGACTTGATCGATGCATTTGGCTACACATGTCAGCTATCGACT
GATAGAAGCTTATCATACATTTAGTTAGGTTAAACACCTCACTGCATATATTTCTTAGTC
AATAACACTGCTCTTTCGGACAAGATAAAGTAAGATGACACAAAAAAATTTGAAATTGAG
AATAATTTTCACGGTTAATTGTCACCGAATCTTTAAAA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)