cluster # 5844

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Schistosoma mansoni
cluster # 5844 cluster # 5844 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5844#0 length = 610 sequences # 3

consensusID : consensus_5844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 610
fasta sequence

                              [TATTGTTGTTTTCTGCGTACCTTGGCTCTATCTTCTTTATGGCTCCATTGCTGCCGTTGGCTGTTCTGTCGCCTGTTTTATTTCGCTATTTTAATGACTTGCTCTTGACATCGTGGCTGATGTTTGCTGAATTTGTAATATGCAA-AGTTTTTGGTTGTCGTATCCGTCATTTTGGTGACCGAGTTATACCATCCACCACTACTGAACACCATAGCTGTCTCTTTCTGATCAACCATCGGACGCAATTAGATTGGTTCTTCGTGTGGGGTTTAGGTGATCCAATCCAGCGTATGAAAATAATTCTTAAGGATTCTCTTGCGAAAGTTCCAGGTGCTGGTTGGGCTATGCAATGTGGTAGCTTTATATTCTTACGCCGGCGTATTGCAACAGATCAACAGCGGTTACAAAAAATTGTGGAATATTTACTCAAAGTTAAACAAAGTTGCCAATTGTTAATCTTTCCTGAGGGCACAAATTTGAACAGTAAATCGTTGGAGAGAAGTGACAGTTACGGGGAGCAAAATAATCTACCATATGTTCGTTATACACTTCATCCTAGAAGTACTGGATTCTTGCATNTAGTAAAACTGATCGGCTTAGATAATCTAAC]

[-] EMBL CD202882             [TATTGTTGTTTTCTGCGTACCTTGGCTCTATCTTCTTTATGGCTCCATTGCTGCCGTTGGCTGTTCTGTCGCCTGTTTTATTTCGCTATTTTAATGACTTGCTCTTGACATCGTGGCTGATGTTTGCTGAATTTGTAATATGCAA AGTTTTTGGTTGTCGTATCCGTCATTTTGGTGACCGAGTTATACCATCCACCACTACTGAACACCATAGCTGTCTCTTTCTGATCAACCATCGGACGCAATTAGATTGGT                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD135603             [                                                                                                                        TGTTTGCTGAATTTGTTATATGCAAGAGTTTTTGGTTGTCGTATCCGTCATTTTGGTGACCGAGTTATACCATCCACCACTACTGAACACCATAGCTGTCTCTTTCTGATCAACCATCGGACGCAATTAGATTGGTTCTTCGTGTGGGGTTTAGGTGATCCAATCCAGCGTATGAAAATAATTCTTAAGGATTCTCTTGCGAAAGTTCCAGGTGCTGGTTGGGCTATGCAATGTGGTAGCTTTATATTCTTACGCCGGCGTATTGCAACAGATCAACAGCGGTTACAAAAAATTGTGGAATATTTACTCAAAGTTAAACAAAGTTGCCAATTGTTAATCTTTCCTGAGGGCACAAATTTGAACAGTAAATCGTTGGAGAGAAGTGACAGTTACGGGGAGCAAAATAATCTACCATATGTTCGTTATACACTTCATCCTAGAAGTACTGGATTCTTGCATNTA                             ]
[+] EMBL CD192007             [                                                                                                                                                                                                                                                                                                                                                                     AGCTTTATATTCTTACGCCGGCGTATTGCAACAGATCAACAGCGGTTACAAAAAATTGTGGAATATTTACTCAAAGTTAAACAAAGTTGCCAATTGTTAATCTTTCCTGAGGGCACAAATTTGAACAGTAAATCGTTGGAGAGAAGTGACAGTTACGGGGAGCAAAATAATCTACCATATGTTCGTTATACACTTCATCCTAGAAGTACTGGATTCTTGCATTTAGTAAAACTGATCGGCTTAGATAATCTAAC]




>consensus_5844#0
TATTGTTGTTTTCTGCGTACCTTGGCTCTATCTTCTTTATGGCTCCATTGCTGCCGTTGG
CTGTTCTGTCGCCTGTTTTATTTCGCTATTTTAATGACTTGCTCTTGACATCGTGGCTGA
TGTTTGCTGAATTTGTAATATGCAAAGTTTTTGGTTGTCGTATCCGTCATTTTGGTGACC
GAGTTATACCATCCACCACTACTGAACACCATAGCTGTCTCTTTCTGATCAACCATCGGA
CGCAATTAGATTGGTTCTTCGTGTGGGGTTTAGGTGATCCAATCCAGCGTATGAAAATAA
TTCTTAAGGATTCTCTTGCGAAAGTTCCAGGTGCTGGTTGGGCTATGCAATGTGGTAGCT
TTATATTCTTACGCCGGCGTATTGCAACAGATCAACAGCGGTTACAAAAAATTGTGGAAT
ATTTACTCAAAGTTAAACAAAGTTGCCAATTGTTAATCTTTCCTGAGGGCACAAATTTGA
ACAGTAAATCGTTGGAGAGAAGTGACAGTTACGGGGAGCAAAATAATCTACCATATGTTC
GTTATACACTTCATCCTAGAAGTACTGGATTCTTGCATNTAGTAAAACTGATCGGCTTAG
ATAATCTAAC

clustalw multiple alignements is not computed in this case