Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6024 cluster # 6024       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6024#0 length = 345 sequences # 4  

consensusID : consensus_6024#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 345
fasta sequence
                              [AGGNCTACAAAATGGAGNAAGCAACTTCCAACTA-GGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG-CTTACC]

[+] EMBL CD063275             [AGGNCTACAAAATGGAGNAAGCAACTTCCAACTAGGGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCTGATGCTAACCATGTAGGAGG CTTAC ]
[+] EMBL CD126192             [                       ACTT CAACTA GGT CAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG CTTAC ]
[+] EMBL CD126260             [                          ttCAACTA GGT CAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG CTTAC ]
[-] EMBL CD062963             [                             AACTA GGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTACAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGGTGCTAACCATGTAGGAGGACTTACC]


>consensus_6024#0 AGGNCTACAAAATGGAGNAAGCAACTTCCAACTAGGTCCAGCTCGTTCTTCTCAGGTGTT GTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCC ACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTAT AAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTG GTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAAC AAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGGCTTACC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)