cluster # 6044

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Schistosoma mansoni
cluster # 6044 cluster # 6044 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6044#0 length = 348 sequences # 4

consensusID : consensus_6044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 348
fasta sequence

                              [ACATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAATGACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAACTATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCCTGTGTCACTGCTTTGTTAGCCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGTATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGCTGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTTT]

[+] EMBL CD118833             [ACATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAATGACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAACTATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCCTGTGTCACTGCTTTGTTAACCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGTATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGCTGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTT ]
[-] EMBL CD118779             [ CATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAATGACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAACTATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCCTGTGTCACTGCTTTGTTAGCCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGTATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGCTGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTTT]
[-] EMBL CD118840             [ CATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAATGACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAACTATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCCTGTGTCACTGCTTTGTTAGCCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGTATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGCTGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTTT]
[-] EMBL CD118761             [ CATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAATGACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAACTATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCCTGTGTCACTGCTTTGTTAGCCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGTATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGCTGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTTT]




>consensus_6044#0
ACATCTTAACAGTTTTCCATGTGCTCAAGAATTCTTCCTCCTAAATAAAACTATTTTAAT
GACCCATTTTTCATGTATGCACAAAACAGCGAAGTGGCTTTATGAAGTCATTCTGTAAAC
TATCTACAATCATAAAGTATGAAGAGAAAGATAGAACTGTAATGAGAATGAACTAGTTCC
TGTGTCACTGCTTTGTTAGCCTTAAAATTAGAAACCAACTGTGAACACGATAATATTTGT
ATAAAAACACTGTACAAGTTTTATTTTCCTAAGTGTTTTACAGTAAACTGTGAGCATTGC
TGATAGATATTCATTAGCTGATACAAAATATTAAAAACCTTATTTTTT

clustalw multiple alignements is not computed in this case