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Schistosoma mansoni
cluster # 6176 cluster # 6176       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6176#0 length = 1711 sequences # 4  

consensusID : consensus_6176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1711
fasta sequence
                              [GAAAACCTTTGTTTAAAAGCGAAAAATGGTGCACAAAATGGTAATGTGGAAAATGGAAAATCAATTTTTAATCAAAAATCTTGTCAATTTGTTTCACCTACATTTTGTTCGCGTAATAATCTTCCGTCACCAGGTGTAAAGAATTCAGATAGTTCTGCATTTCCGCATCTTATCAATAGTGGTCCTCCTTTGAACATCAATAATAAAAGTGTTGGTGTTTATGCATTATCTGAACTACCGAACACATCATCATTATCCATGCAAGGTGTTTACGAAAAGAACCTCGTTGAGAATTCGAATAGCAGAAGAACAATAGTTCCACCTGGTCGAGTGTATCATAGAACAGTAGATCGAAGGTTAGTAGTACGTGGTCAGGAAAATGATTGCGATTATTCATCTATTAAACCTCAAACCAACAATAAAGGATATGTGAAATCAAAGTCGAATCGACCTAGCATACGTACTTTGTCTAATAATAATTCACGTCAAATTTCACATCATACTGGCAATTCCAGAGATTTCAGTTGTTCTAGAATAGTTAATTCTTCACGATCCAACAACAATACAACTCATTATTCAAGTAACGGCTTAAATCGTTCAATTAAATATTATTCTACTTATCAATTAAATGGACCACATCAATCTGATTCCAGTAGCAGTAGTGGTAATAGTTGTACATCATCAGTTAGTAGTGAATACTCTACAGAAGATTCACCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTGCCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAGTCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTCGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTACTCATCTCCAACCAGGAAAACAGCAATCTTTACGTGTATATACTGCCTTTGATAGTATTCAAAGAAGACCTCAAGTTCCATTTCAACCATCTTTATATTTCTACCCTTCGACAGAACGAATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAGAACTAAAGAATCTCGTGCACGTCCTTTAAGAGCTACACACCCTTGTGATGATAACTCTTTTTTACAATCATTACCTTCAAACCTGTTTGAAAATGAAAATACTTGTAGAAATATCATTTTAAATCCATCTACTTATTATTATGACTATGAACGAACTGATCAATCTGCGAGATTGG]

[+] EMBL SMVIFEPIB            [GAAAACCTTTGTTTAAAAGCGAAAAATGGTGCACAAAATGGTAATGTGGAAAATGGAAAATCAATTTTTAATCAAAAATCTTGTCAATTTGTTTCACCTACATTTTGTTCGCGTAATAATCTTCCGTCACCAGGTGTAAAGAATTCAGATAGTTCTGCATTTCCGCATCTTATCAATAGTGGTCCTCCTTTGAACATCAATAATAAAAGTGTTGGTGTTTATGCATTATCTGAACTACCGAACACATCATCATTATCCATGCAAGGTGTTTACGAAAAGAACCTCGTTGAGAATTCGAATAGCAGAAGAACAATAGTTCCACCTGGTCGAGTGTATCATAGAACAGTAGATCGAAGGTTAGTAGTACGTGGTCAGGAAAATGATTGCGATTATTCATCTATTAAACCTCAAACCAACAATAAAGGATATGTGAAATCAAAGTCGAATCGACCTAGCATACGTACTTTGTCTAATAATAATTCACGTCAAATTTCACATCATACTGGCAATTCCAGAGATTTCAGTTGTTCTAGAATAGTTAATTCTTCACGATCCAACAACAATACAACTCATTATTCAAGTAACGGCTTAAATCGTTCAATTAAATATTATTCTACTTATCAATTAAATGGACCACATCAATCTGATTCCAGTAGCAGTAGTGGTAATAGTTGTACATCATCAGTTAGTAGTGAATACTCTACAGAAGATTCACCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTGCCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAGTCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTCGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTACTCATCTCCAACCAGGAAAACAGCAATCTTTACGTGTATATACTGCCTTTGATAGTATTCAAAGAAGACCTCAAGTTCCATTTCAACCATCTTTATATTTCTACCCTTCGACAGAACGAATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAGAACTAAAGAATCTCGTGCACGTCCTTTAAGAGCTACACACCCTTGTGATGATAACTCTTTTTTACAATCATTACCTTCAAACCTGTTTGAAAATGAAAATACTTGTAGAAATATCATTTTAAATCCATCTACTTATTATTATGACTATGAACGAACTGATCAATCTGCGAGATTGG]
[+] EMBL CD189187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTACCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAATCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTTGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD117001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAG                                                                                                                                                                                ]
[+] EMBL CD189511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cgTCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACT                                                                                                                                                                                              ]


>consensus_6176#0 GAAAACCTTTGTTTAAAAGCGAAAAATGGTGCACAAAATGGTAATGTGGAAAATGGAAAA TCAATTTTTAATCAAAAATCTTGTCAATTTGTTTCACCTACATTTTGTTCGCGTAATAAT CTTCCGTCACCAGGTGTAAAGAATTCAGATAGTTCTGCATTTCCGCATCTTATCAATAGT GGTCCTCCTTTGAACATCAATAATAAAAGTGTTGGTGTTTATGCATTATCTGAACTACCG AACACATCATCATTATCCATGCAAGGTGTTTACGAAAAGAACCTCGTTGAGAATTCGAAT AGCAGAAGAACAATAGTTCCACCTGGTCGAGTGTATCATAGAACAGTAGATCGAAGGTTA GTAGTACGTGGTCAGGAAAATGATTGCGATTATTCATCTATTAAACCTCAAACCAACAAT AAAGGATATGTGAAATCAAAGTCGAATCGACCTAGCATACGTACTTTGTCTAATAATAAT TCACGTCAAATTTCACATCATACTGGCAATTCCAGAGATTTCAGTTGTTCTAGAATAGTT AATTCTTCACGATCCAACAACAATACAACTCATTATTCAAGTAACGGCTTAAATCGTTCA ATTAAATATTATTCTACTTATCAATTAAATGGACCACATCAATCTGATTCCAGTAGCAGT AGTGGTAATAGTTGTACATCATCAGTTAGTAGTGAATACTCTACAGAAGATTCACCTACT ATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTA AATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAA CGTAATGCATTGCCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAA TCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACG CCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCT GTCTCTTTTAAGAAATCTGCATCAAGTAGTCCTTCGAAGTCTAAATTTGTACATAATCTA AAAAATACATTCGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCT ACTCATCTCCAACCAGGAAAACAGCAATCTTTACGTGTATATACTGCCTTTGATAGTATT CAAAGAAGACCTCAAGTTCCATTTCAACCATCTTTATATTTCTACCCTTCGACAGAACGA ATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAA GGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTG AAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGAT GGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTG AACCCGTTATATCGAAAAACTCTATCGTCAGCCAGAACTAAAGAATCTCGTGCACGTCCT TTAAGAGCTACACACCCTTGTGATGATAACTCTTTTTTACAATCATTACCTTCAAACCTG TTTGAAAATGAAAATACTTGTAGAAATATCATTTTAAATCCATCTACTTATTATTATGAC TATGAACGAACTGATCAATCTGCGAGATTGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)