Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6205 cluster # 6205       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6205#0 length = 943 sequences # 4  
consensusID : consensus_6205#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 943
fasta sequence 
                              [TACAAAATAGTATGTGCAACTATGATAGAAATGAATGGATAACATTGTCAATATTAAACGAAGTTGTCCCAGATACTGTATTATACATTTTCCTATCAAAATAAACGTAGAGTAATGCAAATCTCAACATGTGTGTATTCTGATAAAAATACAATGAAGAATGGAGTTAACAAATCATTTATACCTTGTACATAACCAATTCCTGGATGTCGCATAGACCAGACAAATAGAATTCGTTCAAACATCGCAACCATTTCAGGCCTTCGATAAAGTAATGTCATTCTGTTTAAATCTTTCTGAATTTGATGAAACATCGGTTTATGTTTAGCATTTTCACGTAAATGAAAATATTGACTAACAAAAAGTGTATATTGTTTACGTTTATCCGCTAGTACAGTGACACGTCGTACAGGACTAGTTGGAAGATAATCACATAACAATTTCCATACTGTTGGTCGAAGTTCTCCTGGAATTCCAGACCAAGACAGTTGACGCAATACAACTAAATCTGTTATACTTGAGCTGATACACGTATTGAAACGTTGGGTCCGACCTTGATCTAACAGCTTTCGATGAGCAACAGGAAAATCATCAGGACTTGCTCTCAATCTCACACCCATACCAGGAGCATGTTTCGGGGGTTTGTCATATGGC-AGTACGAGTGAATTTTTAACATCCAGAGATTCAATATTTCTGTGCTCCGTCATCCTGCCCGTTTAGCGATAGCCGACTCTTGTGTATGCATATCCAGAACCTTTTGTGCTGTCTTTTGTACAACTTTGGGTGATATTATGTTCAGATATTCACGATCATCTGCATCCCACACATCTTGACTATTGATTTGAAACAAAGCGAATCCTTTTGACCCTTGTCCAGCCATGAAAATTAATAATCAATGACAAATAAAACGCGTTAAATTATACGAACTCCGGGGTAGCGCCAT]

[+] EMBL CD196750             [TACAAAATAGTATGTGCAACTATGATAGAAATGAATGGATAACATTGTCAATATTAAACGAAGTTGTCCCAGATACTGTATTATACATTTTCCTATCAAAATAAACGTAGAGTAATGCAAATCTCAACATGTGTGTATTCTGATAAAAATACAATGAAGAATGGAGTTAACAAATCATTTATACCTTGTACATAACCAATTCCTGGATGTCGCATAGACCAGACAAATAGAATTCGTTCAAACATCGCAACCATTTCAGGCCTTCGATAAAGTAATGTCATTCTGTTTAAATCTTTCTGAATTTGATGAAACATCGGTTTATGTTTAGCATTTTCACGTAAATGAAAATATTGACTAACAAAAAGTGTATATTGTTTACGTTTATCCGCTAGTACAGTGACACGTCGTACAGGACTAGTTGGAAGATAATCACATAACAATTTCCATACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD196549             [TACAAAATAGTATGTGCAACTATGATAGAAATGAATGGATAACATTGTCAATATTAAACGAAGTTGTCCCAGATACTGTATTATACATTTTCCTATCAAAATAAACGTAGAGTAATGCAAATCTCAACATGTGTGTATTCTGATAAAAATACAATGAAGAATGGAGTTAACAAATCATTTATACCTTGTACATAACCAATTCCTGGATGTCGCATAGACCAGACAAATAGAATTCGTTCAAACATCGCAACCATTTCAGGCCTTCGATAAAGTAATGTCATTCTGTTTAAATCTTTCTGAATTTGATGAAACATCGGTTTATGTTTAGCATTTTCACGTAAATGAAAATATTGACTAACAAAAAGTGTATATTGTTTACGTTTATCCGCTAGTACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD196694             [                                                                                                                                                                                                                                                                                                      TTCTGAATTTGATGAAACATCGGTTTATGTTTAGCATTTTCACGTAAATGAAAATATTGACTAACAAAAAGTGTATATTGTTTACGTTTATCCGCTAGTACAGTGACACGTCGTTCAGGACTAGTTGGAAGATAATCACATAACAATTTCCATACTGTTGGTCGAAGTTCTCCTGGAATTCCAGACCAAGACAGTTGACGCAATACAACTAAATCTGTTATACTTGAGCTGATACACGTATTGAAACGTTGGGTCCGACCTTGATCTAACAGCTTTCGATGAGCAACAGGAAAATCATCAGGACTTGCTCTCAATCTCACACCCATACCAGGAGCATGTTTCGGGGGTTTGTCATATGGC AGTACGAGTGAATTTTTAACATCCAGAGATTCAATATTTCTGTGCTCCGTCATCCTGCCCGTTTAGC                                                                                                                                                                                                                              ]
[-] EMBL CD180898             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gGGGGGTTTGTCATATGGCGAGTACGAGTGAATTTTTAACATCCAGAGATTCAATATTTCTGT CTCCGTCATCCTGCCC TTTAGCGATAGCCGACTCTTGTGTATGCATATCCAGAACCTTTTGTGCTGTCTTTTGTACAACTTTGGGTGATATTATGTTCAGATATTCACGATCATCTGCATCCCACACATCTTGACTATTGATTTGAAACAAAGCGAATCCTTTTGACCCTTGTCCAGCCATGAAAATTAATAATCAATGACAAATAAAACGCGTTAAATTATACGAACTCCGGGGTAGCGCCAT]




>consensus_6205#0
TACAAAATAGTATGTGCAACTATGATAGAAATGAATGGATAACATTGTCAATATTAAACG
AAGTTGTCCCAGATACTGTATTATACATTTTCCTATCAAAATAAACGTAGAGTAATGCAA
ATCTCAACATGTGTGTATTCTGATAAAAATACAATGAAGAATGGAGTTAACAAATCATTT
ATACCTTGTACATAACCAATTCCTGGATGTCGCATAGACCAGACAAATAGAATTCGTTCA
AACATCGCAACCATTTCAGGCCTTCGATAAAGTAATGTCATTCTGTTTAAATCTTTCTGA
ATTTGATGAAACATCGGTTTATGTTTAGCATTTTCACGTAAATGAAAATATTGACTAACA
AAAAGTGTATATTGTTTACGTTTATCCGCTAGTACAGTGACACGTCGTACAGGACTAGTT
GGAAGATAATCACATAACAATTTCCATACTGTTGGTCGAAGTTCTCCTGGAATTCCAGAC
CAAGACAGTTGACGCAATACAACTAAATCTGTTATACTTGAGCTGATACACGTATTGAAA
CGTTGGGTCCGACCTTGATCTAACAGCTTTCGATGAGCAACAGGAAAATCATCAGGACTT
GCTCTCAATCTCACACCCATACCAGGAGCATGTTTCGGGGGTTTGTCATATGGCAGTACG
AGTGAATTTTTAACATCCAGAGATTCAATATTTCTGTGCTCCGTCATCCTGCCCGTTTAG
CGATAGCCGACTCTTGTGTATGCATATCCAGAACCTTTTGTGCTGTCTTTTGTACAACTT
TGGGTGATATTATGTTCAGATATTCACGATCATCTGCATCCCACACATCTTGACTATTGA
TTTGAAACAAAGCGAATCCTTTTGACCCTTGTCCAGCCATGAAAATTAATAATCAATGAC
AAATAAAACGCGTTAAATTATACGAACTCCGGGGTAGCGCCAT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)