These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 846 fasta sequence [ATACTTTAATGAGACCAAATATGCGAAGTTGATGTACACCATCCATAATAAAACCATATGGTACATCAGTTGGCCAATTAGGTGGATGTGATGTAAAGGCAGAACTATAGAACTCACGGTTTGATTTCAACTGAGACAACACCAGTGGTTGAGAAATTGGTAAACAAGAGGTAACAGATTCCTTTCCATTTGTCCAAACACTAGTACTGGATTGCATGAGATTATCAAGTTTATCACTCGTATATATGTGTTTATCATTCATGTCCTTTACGAAAGGTGTATCTTGAAACATCCC-AAGAGAAGGACTCAAACAATCTAGTTGTCCATTTGAAGAAACAAGGCAACTCATGCTGTACTCGGAACCACTGAAATAAAAGACTAATCTAGGGTCCTGAACTACAAATAAAAAAGATCCAAGAACTCGTACAGTAGTTCCACCTCCAACTAAAACGTTTTGTCGTTGAACTTCCAGTATAGATGGATTCGGTGTATAGATAAATGAAAATGAATGTGATAGATAAGTTAAAGTCATATCATGCATTATAACTAATGATAATGGTATATGATGTTCGTCTTCTGCTATCGTTGTTGTTTCTGGTGTTATTAATGTCTTATTATTGTCATTATAGTAGGAGTTTACAAATAATGAATGGCGTTTGAATTGTTTTTTGTTTTTCATTGTATTCATTGTTTCTTTAAGTAATGGAGTGGTTAAACAAACTATTAATGTTTCAGATTCTTGTTCAATTTCACATTTCACTTGAACATCTGATTCTGAAAACCTATCTTGATAAGATTCATCACTTGTCCCACTGATTGTTGGGAGATATAAATAAACAGCGCGTT] [+] EMBL CD196601 [ATACTTTAATGAGACCAAATATGCGAAGTTGATGTACACCATCCATAATAAAACCATATGGTACATCAGTTGGCCAATTAGGTGGATGTGATGTAAAGGCAGAACTATAGAACTCACGGTTTGATTTCAACTGAGACAACACCAGTGGTTGAGAAATTGGTAAACAAGAGGTAACAGATTCCTTTCCATTTGTCCAAACACTAGTACTGGATTGCATGAGATTATCAAGTTTATCACTCGTATATATGTGTTTATCATTCATGTCCTTTACGAAAGGTGTATCTTGAAACATCCCTAAGAGAAGGACTCATACAATCTAGTTGTCCATTTGAAGAAACAAGGCAACTCATGCTGTACTCGGAACCTCTGAAATAAAAGACTAATCTAGGGTCCTGAACTACAAATCAAATAGATC ] [+] EMBL CD196951 [ TCCTTTCCATTTGTCCAAACACTAGTACTAGATTGCATGAGATTATCAAGTTTTTCACTCGTATATATGTGTTTATCATTCATGTCCTTTACGAAAGGTGTATCTTGAAACATCCC AAGAGAAGGACTCAAACAATCTAGTTGTCCATTTGAAGAAACAAGGCAACTCATGCTGTACTCGGAACCACTGAAATAAAAGACTAATCTAGGGTCCTGAACTACAAATAAAAAAGATCCAAGAACTCGTACAGTAGTTCCACCTCCAACTAAAACGTTTTGTCGTTGAACTTCCAGTATAGATGGATTCGGTGTATAGATAAATGAAAATGAATGTGATAGATAAGTTAAAGTCATATCATGCATTATAACTAATGATAATGGTATATGATGTTCGTCTTCTGCTATCGTTGTTGTTTCTGGTGTTATTAATGTCTTATTATTGTC ] [+] EMBL CD162068 [ GGTGTATCTTGAAACATCCC AAGAGAAGGACTCAAACAATCTAGTTGTCCATTTGAAGAAACAAGGCAACTCATGCTGTACTCGGAACCACTGAAATAAAAGACTAATCTAGGGTCCTGAACTACAAATAAAAAAGATCCAAGAACTCGTACAGTAGTTCCACCTCCAACTAAAACGTTTTGTCGTTGAACTTCCAGTATAGATGGATTCGGTGTATAGATAAATGAAAATGAATGTGATAGATAAGTTAAAGTCATATCATGCATTATAACTAATGATAATGGTATATGATGTTCGTCTTCTGCTATCGTTGTTGTTTCTGGTGTTATTAATGTCTTATTATTGTCATTATAGTAGGAGTTTACAAATAATGAATGGCGTTTGAATTGTTTTTTGTTTTTCATTGTATTCATTGTTTCTTTAAGTAATGGAGTGGTTAAACAAACTATTAATGTTTCAGATTCTTGTTCAATTTCACATTTCACTTGAACATCTGATTCTGAAAACCTATCTTGATAAGATTCATCACTTGTCCCACTGATTGTTGGGAGATATAAATAA ] [-] EMBL CD196662 [ CGTACAGTAGTTCCACCTCCAACTAAAACGTTTTGTCGTTGAACTTCCAGTATAGATGGATTCGGTGTATAGATAAATGAAAATGAATGTGATAGATAAGTTAAAGTCATATCATGCATTATAACTAATGATAATGGTATATGATGTTCGTCTTCTGCTATCGTTGTTGTTTCTGGTGTTATTAATGTCTTATTATTGTCATTATAGTAGGAGTTTACAAATAATGAATGGCGTTTGAATTGTTTTTTGTTTTTCATTGTATTCATTGTTTCTTTAAGTAATGGAGTGGTTAAACAAACTATTAATGTTTCAGATTCTTGTTCAATTTCACATTTCACTTGAACATCTGATTCTGAAAACCTATCTTGATAAGATTCATCACTTGTCCCACTGATTGTTGGGAGATATAAATAAACAGCGCGTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||