cluster # 6310

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Schistosoma mansoni
cluster # 6310 cluster # 6310 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6310#0 length = 445 sequences # 4

consensusID : consensus_6310#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 445
fasta sequence

                              [TCAACAGAGTATTGCTGAACCTGATGGAAGATTCAGCAGACGCACAGCTTCGAAATCAACAGACTGGATTCCTTAAAGATCGGTCATGCACAGAACAAAACGCGACACTACGAATCATCGTTCAACAATCAATTAAATGGAATTTGTCAATATACATCAACTTCCTTGACTGTGAGAAAGCAGTTGATAATGTGGATAGGATAAACGTATGGGACTATCTTCGATACCACAACGTATTTGAGAGGATCGTCAACGTTATTTGAAATTCTTACAACGGACTACACTGCAGAGAAGTAGCAGCAGCCTCTGCATCAGTAGGCATCAGTAGGAAAAACCTAAGATCCTCAAATACCACACAGAGAACACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTACTTGATCAGCATCATCGATGAACAA]

[+] EMBL CD162903             [TCAACAGAGTATTGCTGAACCTGATGGAAGATTCAGCAGACGCACAGCTTCGAAATCAACAGACTGGATTCCTTAAAGATCGGTCATGCACAGAACAAAACGCGACACTACGAATCATCGTTCAACAATCAATTAAATGGAATTTGTCAATATACATCAACTTCCTTGACTGTGAGAAAGCAGTTGATAATGTGGATAGGATAAACGTATGGGACTATCTTCGATACCACAACGTATTTGAGAGGATCGTCAACGTTATTTGAAATTCTTACAACGGACTACACTGCAGAGAAGTAGCAGCAGCCTCTGCATCAGTAGGCATCAGTAGGAAAAACCTAAGATCCTCAAATACCACACAGAGAACACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTACTTGATCAGCATCATCGATGAA   ]
[+] EMBL CD162812             [TCAACAGAGTATTGCTGAACCTGATGGAAGATTCAGCAGACGCACAGCTTCGAAATCAACAGACTGGATTCCTTAAAGATCGGTCATGCACAGAACAAAACGCGACACTACGAATCATCGTTCAACAATCAATTAAATGGAATTTGTCAATATACATCAACTTCCTTGACTGTGAGAAAGCAGTTGATAATGTGGATAGGATAAACGTATGGGACTATCCTCGATACCACAACGTATTTGAGAGGATCGTCAACGTTATTTGAAATTCTTACAACGGACTACACTGCAGAGAAGTAGCAGCAGCCTCTGCATCAGTAGGCATCAGTAGGAAAAACCTAAGATCCTCAAATACCACACAGAGAACACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTACTTGATCAGCATCATCGATGAA   ]
[-] EMBL CD180733             [  agCAGAGTATTGCTGAACCTGATGGAAGATTCAGCAGACGCACAGCTTCGAAATCAACAGACTGGATTCCTTAAAGATAGGTCATGCACAGAACAAAACGCGACACTACGAATCATCGTTCAACAATCAATTAAATGGAATTTGTCAATATACATCAACTTCCTTGACTGTGAGAAAGCAGTTGATAATGTGGATAGGATAAACGTATGGGACTATCTTCGATACCACAACGTATTTGAGAGGATCGTCAACGTTATTTGAAATTCTTACAACGGACTACACTGCAGAGAAGTAGCAGCAGCCTCTGCATCAGTAGGCATCAGTAGGAAAAACCTAAGATCCTCAAATACCACACAGAGAACACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTACTTGATCAGCATCATCGATGAAC  ]
[-] EMBL CD163039             [                                                                                                                                                                                                                                                                                                                                                              tccctACAGAGAAGACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTACTTGATCAGCATCATCGATGAACAA]




>consensus_6310#0
TCAACAGAGTATTGCTGAACCTGATGGAAGATTCAGCAGACGCACAGCTTCGAAATCAAC
AGACTGGATTCCTTAAAGATCGGTCATGCACAGAACAAAACGCGACACTACGAATCATCG
TTCAACAATCAATTAAATGGAATTTGTCAATATACATCAACTTCCTTGACTGTGAGAAAG
CAGTTGATAATGTGGATAGGATAAACGTATGGGACTATCTTCGATACCACAACGTATTTG
AGAGGATCGTCAACGTTATTTGAAATTCTTACAACGGACTACACTGCAGAGAAGTAGCAG
CAGCCTCTGCATCAGTAGGCATCAGTAGGAAAAACCTAAGATCCTCAAATACCACACAGA
GAACACCAACTCAATCACACTTAATGGAGACACTCTGGAAGAGCTGGAGATTTTCACGTA
CTTGATCAGCATCATCGATGAACAA

clustalw multiple alignements is not computed in this case