cluster # 6652

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Schistosoma mansoni
cluster # 6652 cluster # 6652 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6652#0 length = 380 sequences # 4

consensusID : consensus_6652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 380
fasta sequence

                              [GGAGGGTTTTATTTGCTTTTGATAAAAAAATAGTAATCAACCCCAATCAATAGTTCAGGCGTAATATACATGAATATCTTGAAGACAGGTAGGAAAACACAAACCAGCTAATCGTTTGGAGTCAATGAGTGCTGTGGAGATTTCAGCGTAGGTCTTTGGTGATTTTGTTGGGAAAGTATTCTGTGCACATGAGCTTCAAGCAAATCAACATGCTTCTCTGCATTAGTTAGTTTACTGTCTAATTGAGATAACTTTGTCCGACATGAAGAGTCAAAACGATTGAGGAAATTTACTAAGCTTTTAATATTTGTAGTAATTACATCAATCCTTTCGCGGTTACCCCAGTCATCCTTAATTTCCTTAGCAGGCCTGAAGGTCGA]

[+] EMBL CD073471             [GGAGGGTTTTATTTGCTTTTGATAAAAAAATAGTAATCAACCCCAATCAATAGTTCAGGCGTAATATACATGAATATCTTGAAAACAGGTAGGAAAACACAAACCACCTAATCGTTTGGAGTCAATGAGTGCTGGGGAAATTTCACCGTAGGTCTTTGGTGATTTTGTTGGGAAAGTATTCTGTGCACATGACCTTCAAGCAAATCAACATGCTTTTTTGCATTAGTTAGTTTACTGTCTAATTGAAATAACTTTGTCCGACATGAAAAGTCAAAACGATTGAGGAAATTTACTAACCTTTTAATATTTGTAGTAATTACATCAATCCTTTCGCGGTTACCCCAGTCATCCTTAATTTCCTTACCAGGCCTGAAGGTCaa]
[-] EMBL CD079020             [ tAGGGTTTTATTTGCTTTTGATAAAGAAATAGTAATCAAGCCCAATCAATAGTTCAGGCGTAATATACATGAATATCTTGAAGACAGGTAGGAAAACACAAACCAGCTAATCGTTTGGAGTCAATGAGTGCTGTGGAGATTTCAGCGTAGGTCTTTGGTGATTTTGTTGGGAGAGTATTCTGTGCACATGAGCTTCAAGCAAATCAACATGCTTCTCTGCATTAGTTAGTTTACTGTCTAATTGAGATAACTTTGTCCGACATGAAGAGTCAAAACGATTGAGGAAATTTACTAAGCTTTTAATATTTGTAGTAATTACATCAATCCTTTCGCGGTTACCCCAGTCATCCTTAATTTCCTTAGCAGGCCTGAAGGTCGA]
[-] EMBL CD148293             [                                                     TTCAGGCGTAATATACATGAATATCTTGAAGACAGGTAGGAAAACACAAACCAGCTAATCGTTTGGAGTCAATGAGTGCTGTGGAGATTTCAGCGTAGGTCTTTGGTGATTTTGTTGGGAAAGTATTCTGTGCACATGAGCTTCAAGCAAATCAGCATGCTTCTCTGCATTAGTTAGTTTACTGTCTAATTGAGATAACTTTGTCCGACATGAAGAGTCAAAACGATTGAGGAAATTTACTAAGCTTTTAATATTTGTAGTAATTACATCAA                                                       ]
[-] EMBL CD154756             [                                                                                                                                                       GTCTTTGGTGATTTTGTTGGGAGAGTATTCTGTGCGCATGAGCTTCAAGCAAATCAACATGCTTCTCTGCATTAGTTAGTTTACTGTCTAATTGAGATAACTTTGTCCGACATGAAGAGTCAAAACGATTGAGGAAATTTACTAAGCTTTTAATATTTGTAGTAATTACATCAATCCTTTCGCGGTTACCCCAGTCATCCTTAATTTCCTTAGCAGCCCTGAAGGTCG ]




>consensus_6652#0
GGAGGGTTTTATTTGCTTTTGATAAAAAAATAGTAATCAACCCCAATCAATAGTTCAGGC
GTAATATACATGAATATCTTGAAGACAGGTAGGAAAACACAAACCAGCTAATCGTTTGGA
GTCAATGAGTGCTGTGGAGATTTCAGCGTAGGTCTTTGGTGATTTTGTTGGGAAAGTATT
CTGTGCACATGAGCTTCAAGCAAATCAACATGCTTCTCTGCATTAGTTAGTTTACTGTCT
AATTGAGATAACTTTGTCCGACATGAAGAGTCAAAACGATTGAGGAAATTTACTAAGCTT
TTAATATTTGTAGTAATTACATCAATCCTTTCGCGGTTACCCCAGTCATCCTTAATTTCC
TTAGCAGGCCTGAAGGTCGA

clustalw multiple alignements is not computed in this case