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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6901 cluster # 6901       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6901#0 length = 913 sequences # 4  

consensusID : consensus_6901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 913
fasta sequence
                              [CGTGCTCAAATATTAGATCTGTGTTGTGGTAAGGGTGGAGACCAGTTAAAATGGTTACGCGGCGGTGTTCAACATGTAACTTTTGTGGATTTGTCCAAAGAGTCTATTGAGGTTTGTCGTCATCGGTATGAACAACTGTGTAGAAATAAACGGTCTGTTTTCACTGCAGACTTTTTCGTGGCGGACTGCTCAGAAGCTATACTCCCACAAGTGCTTCCATCTGGTGTCTTATATGACTTAGTCAGTTGTCAGTTCGCACTTCATTATGCTTTTGAGAGCATAACTCAGGCACGTACGATTTTGTCAAATATTAGCTCTCTGTTACGAGAAAATGGTTTTTTCATTGCAACAATTCCAAATGCTTACGAACTTTTGCGCAGAGCTACTGAAGCGTTAAACAAACATGTACAAAAACAAGCTTCAGAATTTGATATAGAGGAAATTAAGTTTGGAAATCCTGTATATTCAGTCACATTTCCAAAAGCTTCATTCTCAATCAAGCGAATAGCAAACCAAACGAAAGTTGCGCTTGCATTAACATTTCCTTTATTTGGGGCAAAGTACAACTTTTTCCTGGATGGAGTTGTGAACTGCCCTGAATTTGTAGTATACCCACCGCTCTTGGATAGGTTGGCAGCTGATTACGGATTGATACCCATACATGAACCTATCTCTTTCGCCAAGAATTTTTATTCCACGTTACGCAACCGTTCAAGCCC-CA-AGACCCAAAGGATTTGCTCAAGAGAATGGAAGCTTTA-AACCATGNNCATAT-AGTCATAACTATTCTTGCTC-AACGATGATGATATATCCATCNTGTAGACATCAAATAGTTNGCCAGCATTCAACTCTNATGACTCTTCGAGTCTGATGGGAGTACTCTATGACTCTTGCTGNTTATAGAAAACCCGATAGT]

[+] EMBL CD079440             [CGTGCTCAAATATTAGATCTGTGTTGTGGTAAGGGTGGAGACCAGTTAAAATGGTTACGCGGCGGTGTTCAACATGTAACTTTTGTGGATTTGTCCAAAGAGTCTATTGAGGTTTGTCGTCATCGGTATGAACAACTGTGTAGAAATAAACGGTCTGTTTTCACTGCAGACTTTTTCGTGGCGGACTGCTCAGAAGCTATACTCCCACAAGTGCTTCCATCTGGTGTCTTATATGACTTAGTCAGTTGTCAGTTCGCACTTCATTATGCTTTTGAGAGCATAACTCAGGCACGTACGATTTTGTCAAATATTAGCTCTCTGTTACGAGAAAATGGTTTTTTCATTGCAACAATTCCAAATGCTTACGAACTTTTGCGCAGAGCTACTGAAGCGTTAAACAAACATGTACAAAAACAAGCTTCAGAATTTGATATAGAGGAAATTAAGTTTGGAAATCCTGTATATTCAGTCACATTTCCAAAAGCTTCATTCTCAATCAAGCGAATAGCAAACCAAACGAAAGTTGCGCTTGCATTAACATTTCCTTTATTTGGGGCAAAGTACAACTTTTTCCTGGATGGAGTTGTGAACTGCCCTGAATTTGTAGTATACCCACCGCTCTTGGATAGGTTGGCAGCTGATTACGGATTGATACCCATACATGAACCTATCTCTTTCGCCAAGAATTNTTATTCCACGTTACGCAACCGTTCAAGCCC CACAGACCCANAGGATTTGCTCAAGAGAATGGAAGCTTTA AACCATGNNCATAT AGTCATAACTATTCTTGCTC AACGATGATGATATATCCATCNTGTAGACATCAAATAGTTNGCCAGCATTCAACTCTNATGACTCTTCGAGTCTGATGGGAGTACTCTATGACTCTTGCTGNTTATAGAAAACCCGATAGT]
[+] EMBL CD128386             [                                                                                               CAAAGAGTCTATTGAGGTTGGTCGTCATCGGTATGAACAACTGTGTAGAAATAAACGGTCTGTTTTCACTGCAGACTTTTTCGTGGCGGACTGCTCAGAAGCTATACTCCCACAAGTGCTTCCATCTGGTGTCTTATATGGCTTAGTCAGTTGTCAGTTCGCACTTCATTATGCTTTTGAGAGCATAACTCAGGCACGTACGATTTTGTCAAATATTAGCTCTCTGTTACGAGAAAATGGTTTTTTCATTGCAACAATTCCAAATGCTTACGAACTTTTGCGCAGAGCTACTGAAGCGTTAAACAAACATGTACAAAAACAAGCTTCAGAATTTGATATAGAGGAAATTAAGTTCGGAAATCCTGTATATTCAGTCACATTTCCAAAAGCTTCATTCTCAATCAAGCGAATAG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD128451             [                                                                                                                                                                                                                                                                                                                                                                                                                                      AGAATTTGATATAGAGGAAATTAAGTTTGGAAATCCTGTATATTCAGTCACATTTCCAAAAGCTTCATTCTCAATCAAGCGAATAGCAAACCAAACGAAAGTTGCGCTTGCATTAACATTTCCTTTATCTGGGGCAAAGTACAACTTTTTCCTGGATGGAGTTGTGAACTGCCCTGAATTTGTAGTATACCCACCGATCTTGGATAGGTTGGCAGCTGATTACGGATTGATACCCATACATGAACCTATCTCTTTCGCCAAGAATTTTTATTCCACGTTACGCAACCGTTCAAGCCCACA AGACCCAAAG                                                                                                                                                                                         ]
[+] EMBL CD181922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AACTGCCCTGAATTTGTAGTATACCCACCGCTCTTGGATAGGTTGGCAGGTGATTACGGATTGATACCCATACATGAACCTATCTCTTTCGCCAAGAATTTTTATTCCACGTTACGCAACCGTTCAAGCCCACA AGACCCAAAGGATTTGCTCAAGAGAATGGAAGCTTTAGAACCATG GCATATAAGTCATAACTATTCTTGCTCAAACGA                                                                                                                    ]


>consensus_6901#0 CGTGCTCAAATATTAGATCTGTGTTGTGGTAAGGGTGGAGACCAGTTAAAATGGTTACGC GGCGGTGTTCAACATGTAACTTTTGTGGATTTGTCCAAAGAGTCTATTGAGGTTTGTCGT CATCGGTATGAACAACTGTGTAGAAATAAACGGTCTGTTTTCACTGCAGACTTTTTCGTG GCGGACTGCTCAGAAGCTATACTCCCACAAGTGCTTCCATCTGGTGTCTTATATGACTTA GTCAGTTGTCAGTTCGCACTTCATTATGCTTTTGAGAGCATAACTCAGGCACGTACGATT TTGTCAAATATTAGCTCTCTGTTACGAGAAAATGGTTTTTTCATTGCAACAATTCCAAAT GCTTACGAACTTTTGCGCAGAGCTACTGAAGCGTTAAACAAACATGTACAAAAACAAGCT TCAGAATTTGATATAGAGGAAATTAAGTTTGGAAATCCTGTATATTCAGTCACATTTCCA AAAGCTTCATTCTCAATCAAGCGAATAGCAAACCAAACGAAAGTTGCGCTTGCATTAACA TTTCCTTTATTTGGGGCAAAGTACAACTTTTTCCTGGATGGAGTTGTGAACTGCCCTGAA TTTGTAGTATACCCACCGCTCTTGGATAGGTTGGCAGCTGATTACGGATTGATACCCATA CATGAACCTATCTCTTTCGCCAAGAATTTTTATTCCACGTTACGCAACCGTTCAAGCCCC AAGACCCAAAGGATTTGCTCAAGAGAATGGAAGCTTTAAACCATGNNCATATAGTCATAA CTATTCTTGCTCAACGATGATGATATATCCATCNTGTAGACATCAAATAGTTNGCCAGCA TTCAACTCTNATGACTCTTCGAGTCTGATGGGAGTACTCTATGACTCTTGCTGNTTATAG AAAACCCGATAGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)