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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6930 cluster # 6930       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6930#0 length = 1179 sequences # 4  

consensusID : consensus_6930#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1179
fasta sequence
                              [GAAGACCGATTTGAAAACAGAATCAATACATGTGGGTTTTTTTTTTATGTTCGCTCCACGAACTTAGTTGACCACACCTCCCAAGGCCATAAGGCCATAAAAATGAATAATTGCGCAAAACAGTTAAAGATGAACCAACAACAACAATTAATTTAGCGGGAGTATCCAGAGAATCCGGAGAGATAGGTTTTACATCAACTGCTTCTGATGTTTTACAGAGATCTTGACATTCCATCTTCATAGCAGGACGCATTCTTTTAAACCATGGGGATCCAATGAGATATTTTTTTGACTCTTCATGGGAACGTTTGCATCCATGATCCAAAACTTTACAGTCATTTGAAGTGGCATTGACAGCATCTTGAAGAACTTTACGACCATGTACAGCTTCGATTGCTGATCGAATGCGATATATTTCTGTTAACCCCATCTCTGGTTGTCGTTCAAAAAAGTGTACAACAACATCTCTTAGCAAAGGTGCCTTCGTAAGAACTGAGTCCGTCAGCCTCTCAGACTTTTGAGTATTGCGCAAATGTTCCACTGCTTTAAGACGTACACCTTCAAAAGATCTGGCTAATTTTCTTGCAGCATATCGGTAACTCAACATAAGATTTTCATTTGATACATTTTTCTTGTATCTAGATACTGCCAAATGTTCAGCTGTTTTTCTTAGTATATCACTGGCTATTGTACTTTCAACAGGGTGTAAATTACGACATTGAGGACAAATGCGTCCAGTAAAATGGTGTGAACGAGAAGTTGTTTCGGCGACGTCAAAAGTCCGGAAAACAGCGTATTCACAAGCGATGCATTGTTCAATAAATAAATTACCATGTAGCTCCGAAAGTTTTTCACGACTTAAACCACTGCGCACATGTAAGCCATCAACATTTTGAGAAACGACATGTCGAACATATCCTTCATCTACCAAAACTTTGATAGCCATATGAGTGAATGTTGGCTTTGCAATGGTTGCTTCTGGAAGTCGTAACTTTAAGTTGGTATTTTTTGACTTTTTGGAAGTTTTAATCCGTGATTCACATTCGGGTATTTTATCCTGTAGTTTTGGGACCTCATTACATTGCGCTTGATCATTTTTGTTAGAACCAACGGTAGGTAGCACTGAATTAACGCCTGTTACGCGATTTGACTGCGTAGTCCACAAACCGTTTGTCCCTC]

[+] EMBL CD082114             [GAAGACCGATTTGAAAACAGAATCAATACATGTGGGTTTTTTTTTTATGTTCGCTCCACGAACTTAGTTGACCACACCTCCCAAGGCCATAAGGCCATAAAAATGAATAATTGCGCAAAACAGTTAAAGATGAACCAACAACAACAATTAATTTAGCGGGAGTATCCAGAGAATCCGGAGAGATAGGTTTTACATCAACTGCTTCTGATGTTTTACAGAGATCTTGACATTCCATCTTCATAGCAGGACGCATTCTTTTAAACCATGGGGATCCAATGAGATATTTTTTTGACTCTTCATGGGAACGTTTGCATCCATGATCCAAAACTTTACAGTCATTTGAAGTGGCATTGACAGCATCTTGAAGAACTTTACGACCATGTACAGCTTCGATTGCTGATCGAATGCGATATATTTCTGTTAACCCCATCTCTGGTTGTCGTTCAAAAAAGTGTACAACAACATCTCTTAGCAAAGGTGCCTTCGTAAGAACTGAGTCCGTCAGCCTCTCAGACTTTTGAGTATTGCGCAAATGTTCCACTGCTTTAAGACGTACACCTTCAAAAGATCTGGCTAATTTTCTTGCAGCATATCGGTAACTCAACATAAGATTTTCATTTGATACATTNTTCTTGTATCTAGATACTGCCAAATGTTCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD145015             [                                                                                                                                                                                                                                      TCCATCTTCATAGCAGGACGCATTCTTTTAAACCATGGGGATCCAATGAGATATTTTTTTGACTCTTCATGGGAACGTTTGCATCCATGATCCAAAACTTTACAGTCATTTGAAGTGGCATTGACAGCATCTTGAAGAACTTTACGACCATGTACAGCTTCGATTGCTGATCGAATGCGATATATTTCTGTTAACCCCATCTCTGGTTGTCGTTCAAAAAAGTGTACAACAACATCTCTTAGCAAAGGTGCCTTCGTAGGAACTGAGTCCGTCAGCCTCTCAGACTTTTGAGTATTGCGCAAATGTTCCACTGCTTTAAAACGTACACCTTCAAAAGATCTGGCTAATTTTCTTGCAGCATATCGGTAACTCAACATAAGATTTTCATTTGATACATTTTTCTTGTATCTAGATACTGCCAAATGTTCAGCTGTTTTTCTTAGTATATCACTGGCTATTGTACTTTCAACAGGGTGTAAATTACGACATTGAGGACAAATGCGTCCAGTAAAATGGTGTGAACGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD184822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCTCAGACTTTTGAGTATTGCGCAAATGTTCCACTGCTTTAAGACGTACACCTTCAAAAGATCTGGCTAATTTTCTTGCAGCATATCGGTAACTCAACATAAGATTTTCATTTGATACATTTTTCTTGTATCTAGATACTGCCAAATGTTCAGCTGTTTTTCTTAGTATATCACTGGCTATTGTACTTTCAACAGGGTGTAAATTACGACATTGAGGACAAATGCGTCCAGTAAAATGGTGTGAACGAGAAGTTGTTTCGGCGACGTCAAAAGTCCGGAAAACAGCGTATTCACAAGCGATGCATTGTTCAATAAATAAATTACCATGTAGCTCCGAAAGTTTTTCACGACTTAAACCACTGCGCACATGTAAGCCATCAAC                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD155426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTACGACATGGAGGACAAATGCGTCCAGTAAAATGGTGTGAACGAGAAGTTGTTTCGGCGACGTCAAAAGTCCGGAAAACAGCGTATTCACAAGCGATGCATTGTTCAATAAATAAATTACCATGTAGCTCCGAAAGTTTTTCACGACTTAAACCACTGCGCACATGTAAGCCATCAACATTTTGAGAAACGACATGTCGAACATATCCTTCATCTACCAAAACTTTGATAGCCATATGAGTGAATGTTGGCTTTGCAATGGTTGCTTCTGGAAGTCGTAACTTTAAGTTGGTATTTTTTGACTTTTTGGAAGTTTTAATCCGTGATTCACATTCGGGTATTTTATCCTGTAGTTTTGGGACCTCATTACATTGCGCTTGATCATTTTTGTTAGAACCAACGGTAGGTAGCACTGAATTAACGCCTGTTACGCGATTTGACTGCGTAGTCCACAAACCGTTTGTCCCTC]


>consensus_6930#0 GAAGACCGATTTGAAAACAGAATCAATACATGTGGGTTTTTTTTTTATGTTCGCTCCACG AACTTAGTTGACCACACCTCCCAAGGCCATAAGGCCATAAAAATGAATAATTGCGCAAAA CAGTTAAAGATGAACCAACAACAACAATTAATTTAGCGGGAGTATCCAGAGAATCCGGAG AGATAGGTTTTACATCAACTGCTTCTGATGTTTTACAGAGATCTTGACATTCCATCTTCA TAGCAGGACGCATTCTTTTAAACCATGGGGATCCAATGAGATATTTTTTTGACTCTTCAT GGGAACGTTTGCATCCATGATCCAAAACTTTACAGTCATTTGAAGTGGCATTGACAGCAT CTTGAAGAACTTTACGACCATGTACAGCTTCGATTGCTGATCGAATGCGATATATTTCTG TTAACCCCATCTCTGGTTGTCGTTCAAAAAAGTGTACAACAACATCTCTTAGCAAAGGTG CCTTCGTAAGAACTGAGTCCGTCAGCCTCTCAGACTTTTGAGTATTGCGCAAATGTTCCA CTGCTTTAAGACGTACACCTTCAAAAGATCTGGCTAATTTTCTTGCAGCATATCGGTAAC TCAACATAAGATTTTCATTTGATACATTTTTCTTGTATCTAGATACTGCCAAATGTTCAG CTGTTTTTCTTAGTATATCACTGGCTATTGTACTTTCAACAGGGTGTAAATTACGACATT GAGGACAAATGCGTCCAGTAAAATGGTGTGAACGAGAAGTTGTTTCGGCGACGTCAAAAG TCCGGAAAACAGCGTATTCACAAGCGATGCATTGTTCAATAAATAAATTACCATGTAGCT CCGAAAGTTTTTCACGACTTAAACCACTGCGCACATGTAAGCCATCAACATTTTGAGAAA CGACATGTCGAACATATCCTTCATCTACCAAAACTTTGATAGCCATATGAGTGAATGTTG GCTTTGCAATGGTTGCTTCTGGAAGTCGTAACTTTAAGTTGGTATTTTTTGACTTTTTGG AAGTTTTAATCCGTGATTCACATTCGGGTATTTTATCCTGTAGTTTTGGGACCTCATTAC ATTGCGCTTGATCATTTTTGTTAGAACCAACGGTAGGTAGCACTGAATTAACGCCTGTTA CGCGATTTGACTGCGTAGTCCACAAACCGTTTGTCCCTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)