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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6935 cluster # 6935       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6935#0 length = 736 sequences # 4  

consensusID : consensus_6935#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 736
fasta sequence
                              [GTCTTTGCTTCACTCGAATTCGAATCCAGGGACTTCTTTGGTGAAGTAATTCGAGAAGTTATCAAGAAAATGCAAGAGTTTACTCATTTCTACTCTATGGATAAAGACTATTTTTTTTATCCCGACCACATAATTGAAAGAGACGATTGT--GATTTTATCTTTCATTTAACATTCATTCTTCGTTATTTATGCTGTCCTGTTTATCGCGGAAAATCTCATGGTTTAGTTGTTACGTGCAAGTCGTTACGGCTAATGGTTCCATTGACTATATTAACCCGTATTATTCATGAATCTGTTCCTCCAAACAAACTATTTAGTTTTCTACCTATCTTTTGCAAAAGCACAGAAAGTTATTGTAATGGTCGAAGCATAGCAATGATTTACCAATCATCTGACATAGACTCAGCTGCTAGGTACTGTGTATCATCATTACAAAATGCTATGGGTACTGGAATAGGCCACTCAACCATCATTTTAGTCGAGGAATCTATATACAAACGTTTTATTAATCGTATGGACAGCCTTATTAATGTAAACACCGCTTCAGAAGAATTAGAAAATTACGAAAAATCAGAATATCCACCATTCTGCACTAATTATACTCATGAAGTAAAATTTTATACAGACTCTGTTGGTGCCAAAATTCTTTGCTATAATCAGAAAATACCACACTCCCCAATTATTGTTTATGATATTACTCCATCATCCGTCAAATTTAGTAGAAGAAGCGGTCCAG]

[+] EMBL CD122753             [GTCTTTGCTTCACTCGAATTCGAATCCAGGGACTTCTTTGGTGAAGTAATTCGAGAAGTTATCAAGAAAATGCAAGAGTTTACTCATTTCTACTCTATGGATAAAGACTATTTTTTTTATCCCGACCACATAATTGAAAGAGACGATTGT  GATTTTATCTTTCATTTAACATTCATTCTTCGTTATTTATGCTGACCTGTTTATCGCGGAAAATCTCATGGTTTAGTTGTTACGTGCAAGTCGTTACGGCTAATGGTTCCATTGACTATATTAACCCGTATTATTCATGAATCTGTTCCTCCAAACAAACTATTTAGTTTTCTACCTATCTTTTGCAAAAGCACAGAAAGTTATTGTAATGGTCGAAGCATAGCAATGATTTACCAATCATCTGACATAGACTCAGCTGCTAGGTACTGTGTATCATCATTACAAAATGCTATGGGTACTGGAATAGGCCACTCAACCATCATTTTAGTCGAGGAATCTATATACAAACGTTTTATTA                                                                                                                                                                                                                                    ]
[-] EMBL CD167510             [                                                              CAAGAAAATGCAAGAGTTTACTCATTTCTACTCTATGGATAAAGACTATTTTTTTTATCCCGACCACATAATTGAAAGAGACGATTGT  GATTTTATCTTTCATTTAACATTCATTCTTCGTTATTTATGCTGTCCTGTTTATCGCGGAAGATCTCATGGTTTAGTTGTTACGTGCAAGTCGTTACGGCTAATGGTTCCATTGACTATA TAACCCGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD082807             [                                                                                                                                               CGATTGTGGGATTTTATCTTTCATTTAACATTCATTCTTCGTTATTTATGCTGTCCTGTTTATCGCGGAAAATCTCATGGTTTAGTTGTTACGTGCAAGTCGTTACGGCTAATGGTTCCATTGACTATATTAACCCGTATTATTCATGAATCTGTTCCTCCAAACAAACTATTTAGTTTTCTACCTATCTTTTGCAAAAGCACAGAAAGTTATTGTAATGGTCGAAGCATAGCAATGATTTACCAATCATCTGACATAGACTCAGCTGCTAGGTACTGTGTATCATCATTACAAAATGCTATGGGTACTGGAATAGGCCACTCAACCATCATTTTAGTCGAGGAATCTATATACAAACGTTTTATTAATCGTATGGACAGCCTTATTAATGTAAACACCGCTTCAGAAGAATTAGAAAATTACGAAAAATCAGAATATCCACCATTCTGCACTAATTATACTCATGAAGTAAAATTTTATACAGACTCTGTTGGTGCCAAAATTCTTTGCTATAATCAGAAAATACCACACTCCCCAATTATTGTTTATGATATTACTCCATCATCCGTCAAATTTAGTAGAAGAAGCGGTCCAG]
[+] EMBL CD182324             [                                                                                                                                                                                                                                                                  TTCCATTGACTATATTAACCCGTATTATTCATGAATCTGTTCCTCCAAACAAACTATTTAGTTTTCTACCTATCTTTTGCAAAAGCACAGAAAGTTATTGTAATGGTCGAAGCATAGCAATGGTTTACCAATCATCTGACATAGACTCAGCTGCTAGGTACTGTGTATCATCATTACAAAATGCTATGGGTACTGGAATAGGCCACTCAACCATCATTTTAGTCGAGGAATCTATATACAAACGTTTTATTAATCGTATGGACAGCCTTATTAATGTAAACACCGCTTCAGAAGAATTAGATAATTACGAAAAATCAGAATATCCACCATTCTGCACTAATTATACTCATGAAGTAAAATTTTATACA                                                                                                                ]


>consensus_6935#0 GTCTTTGCTTCACTCGAATTCGAATCCAGGGACTTCTTTGGTGAAGTAATTCGAGAAGTT ATCAAGAAAATGCAAGAGTTTACTCATTTCTACTCTATGGATAAAGACTATTTTTTTTAT CCCGACCACATAATTGAAAGAGACGATTGTGATTTTATCTTTCATTTAACATTCATTCTT CGTTATTTATGCTGTCCTGTTTATCGCGGAAAATCTCATGGTTTAGTTGTTACGTGCAAG TCGTTACGGCTAATGGTTCCATTGACTATATTAACCCGTATTATTCATGAATCTGTTCCT CCAAACAAACTATTTAGTTTTCTACCTATCTTTTGCAAAAGCACAGAAAGTTATTGTAAT GGTCGAAGCATAGCAATGATTTACCAATCATCTGACATAGACTCAGCTGCTAGGTACTGT GTATCATCATTACAAAATGCTATGGGTACTGGAATAGGCCACTCAACCATCATTTTAGTC GAGGAATCTATATACAAACGTTTTATTAATCGTATGGACAGCCTTATTAATGTAAACACC GCTTCAGAAGAATTAGAAAATTACGAAAAATCAGAATATCCACCATTCTGCACTAATTAT ACTCATGAAGTAAAATTTTATACAGACTCTGTTGGTGCCAAAATTCTTTGCTATAATCAG AAAATACCACACTCCCCAATTATTGTTTATGATATTACTCCATCATCCGTCAAATTTAGT AGAAGAAGCGGTCCAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)