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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6953 cluster # 6953       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6953#0 length = 919 sequences # 4  

consensusID : consensus_6953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 919
fasta sequence
                              [TGAAACGGGTTTTTTCTCAGGACAAAACAAAGAACGATTGTTAGCGCTGAATACAGACTGGTCACCATCAGTAGTCAGTTGGAGTTTGTTATTGGGAATGGAATGCTTTTTGAGACTGCTTTCAGATGATGATCCTAGTTTTTTAGCAATACTTTGGCAAGGAATCTTCTGAGTTTTGCTTTTGGTCATTGATATGTTCCCCAACACTGTCTTGTCTGCATTAGAGGCTGATATTTCTTTCGATTCAAAAGGAGTAAATGGTTTTCGTTTCGTAGGTAATAATGAACTAGGTGTATCAGGGTGCGGCTTTTTGAGTTGATTATTTTTAGATACACTACCTCCCAAAGAATTCTGAAAGACAAAGTCATCCATGATAAGCTTCGCAGAATCATGTTTTTGTGTTTTCTTTGCATTTGCAAGTGGTATATTCAAGAGGGAGGTTGGTTTACATTTATTATTATTTACAAAGTCGTCTCGAGGTGAAGACTTTTGACAAGAAATGGTTTGGTAAGTTGGTGTTTTTTGACTGGTTTTAGCAGAAAAATCATTAGATGATCCCAAAAACGGAGAAACACCATGTACGCCAACTTTATTGGACACATCAACACACTTTTGATTATCATTAACATAAGACGAAAGATTAGCGTTAAACTCCGTTGAGGCGTTATTGAGTGAATGAGATAAAATCACAGGTTCACACTTCTCAACGTAATCGACACTTTCTTTTAGTGTATTGAATTTATTGTCACCTTTTCCCACCAAATTATCTTCAGGTTTTAAAACATCTGACCCACAAAAAGGCTTTACTGACGGCATTCTAGTGGCCACACCAACAGGTTGAGCTCCAGACAATGAACTATGCTCCACATTACACACATTAGAGTGAATACGGTTGTTATTCGGACTTTTTTGTTTCCCG]

[+] EMBL AI976616             [TGAAACGGGTTTTTTCTCAGGACAAAACAAAGAACGATTGTTAGCGCTGAATACAGACTGGTCACCATCAGTAGTCAGTTGGAGTTTGTTATTGGGAATGGAATGCTTTTTGAGACTGCTTTCAGATGATGATCCTAGTTTTTTAGCAATACTTTGGCAAGGAATCTTCTGAGTTTTGCTTTTGGTCATTGATATGTTCCCCAACACTGTCTTGTCTGCATTAGAGGCTGATATTTCTTTCGATTCAAAAGGAGTAAATGGTTTTCGTTTCGTAGGTAATAATGAACTAGGTGTATCAGGGTGCGGCTTTTTGAGTTGATTATTTTTAGATACACTACCTCCCAAAGAATTCTGAAAGACAAAGTCATCCATGATAAGCTTCGCAGAATCATGTTTTTGTGTTTTCTTTGCATTTGCAAGTGGTATATTCAAGAAGGAGGTTGGTTTACATTTATTATTATTTACAAAGTCGTCTCGAGGTGAAGACTTTTGACAAGATAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD094589             [                                                                                                                                                                                                                                                                                                                          GTTGATTATTTTTAGATACACTACCTCCCAAAGAATTCTGAAAGACAAAGTCATCCATGATAAGCTTCGCTGAATCATGTTTTTGTGTTTTCTTTGCATTTGCAAGTGGTATATTCAAGAGGGAGGTTGGTTTACATTTATTATTATTTACAAAGTCGTCTCGAGGTGAAGACTTTTGACAAGAAATGGTTTGGTAAGTTGGTGTTTTTTGACTGGTTTTAGCAGAAAAATCATTAGATGATCCCAAAAACGGAGAAACACCATGTACGCCAACTTTATTGGACACATCAACACACTTTTGATCATCATTAACATAAGACGAAAGATTAGCGTTAAACTCCGTTGAGGCGTTATTGAGTGAATGAGATAAAATCACAGGTTCACACTTCTCAACGTAATCGACACTTTCTTTTAGTGTATTGAATTTATTGTCACCTTTTCCCACCAAATTATCTTCAGGTTTTAAAACATCTGACCCACAAAAAGGCTTTACTGACGGCATTCTAGTGGCCACACCAACAGGTTGAGCTCCAGACAATGAACTATGCTCCACATTACACACATTAGAGTGAATACGGTTGTTATTCGGACTTTTTTGTTTCCCG]
[-] EMBL CD183014             [                                                                                                                                                                                                                                                                                                                                                                                                                     CTTTGCATTTGCAAGTGGTATATTCAAGAGGGAGGTTGGTTTACATTTATTATTATTTACAAAGTCGTCTCGAGGTGAAGACTTTTGACAAGAAATGGTTTGGTAAGTTGGTGTTTTTTGACTGGTTTTAGCAGAAAAATCATTAGATGATCCCAAAAACGGAGAAACACCATGTACGCCAACTTTATTGGACACATCAACACACTTTTGATTATCATTAACATAAGACGAAAG                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD183083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGACTGGTTTTAGCAGAAAAATCATTAGATGATCCCAAAAACGGAGAAACACCATGTACGCCAGCTTTATTGGACACATCAACACACTTTTGATTATCATTAACATAAGACGAAAG                                                                                                                                                                                                                                                                                        ]


>consensus_6953#0 TGAAACGGGTTTTTTCTCAGGACAAAACAAAGAACGATTGTTAGCGCTGAATACAGACTG GTCACCATCAGTAGTCAGTTGGAGTTTGTTATTGGGAATGGAATGCTTTTTGAGACTGCT TTCAGATGATGATCCTAGTTTTTTAGCAATACTTTGGCAAGGAATCTTCTGAGTTTTGCT TTTGGTCATTGATATGTTCCCCAACACTGTCTTGTCTGCATTAGAGGCTGATATTTCTTT CGATTCAAAAGGAGTAAATGGTTTTCGTTTCGTAGGTAATAATGAACTAGGTGTATCAGG GTGCGGCTTTTTGAGTTGATTATTTTTAGATACACTACCTCCCAAAGAATTCTGAAAGAC AAAGTCATCCATGATAAGCTTCGCAGAATCATGTTTTTGTGTTTTCTTTGCATTTGCAAG TGGTATATTCAAGAGGGAGGTTGGTTTACATTTATTATTATTTACAAAGTCGTCTCGAGG TGAAGACTTTTGACAAGAAATGGTTTGGTAAGTTGGTGTTTTTTGACTGGTTTTAGCAGA AAAATCATTAGATGATCCCAAAAACGGAGAAACACCATGTACGCCAACTTTATTGGACAC ATCAACACACTTTTGATTATCATTAACATAAGACGAAAGATTAGCGTTAAACTCCGTTGA GGCGTTATTGAGTGAATGAGATAAAATCACAGGTTCACACTTCTCAACGTAATCGACACT TTCTTTTAGTGTATTGAATTTATTGTCACCTTTTCCCACCAAATTATCTTCAGGTTTTAA AACATCTGACCCACAAAAAGGCTTTACTGACGGCATTCTAGTGGCCACACCAACAGGTTG AGCTCCAGACAATGAACTATGCTCCACATTACACACATTAGAGTGAATACGGTTGTTATT CGGACTTTTTTGTTTCCCG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)