Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7020 cluster # 7020       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7020#0 length = 841 sequences # 4  
consensusID : consensus_7020#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 841
fasta sequence 
                              [ATTATCATCAAATACTCAACTAGACAATAACAAAAACAACCCAATAAAACGTACAGATTCTACACAACAATTAAGAAAAGATTCCATTGATCGAAAATCTTCTATGCTAGCTGAAATTCAACGTCGTATACAAGCTAGACGACAATTAATCGATGCTGCTGAAGAAGAATGTGGTTCGCCTAGAAAAGACCATCATTTAGAATCATCAAAATCTATCTCTGTGTCTTCTGAGAATACCGGTGGTATATCGACTAATTTGATCGACTCATCATTGAATAGCCGAAACGTTAGTACACCTAATTGTTCCACAACATCAAATATTATAAATTCTGATTTATCATTGACTCGGTCAGAATTGGATAATTTACGCCGTGAAATTATTGTTGAACTACGCAAAGAAGTTCAGTTGGCGAAAAATGAAATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGTCTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCTTATGCTATTTCACACATGATACAATCCCACCACCAAATTGAAATTTACAATAACCTGTTTGCTTGTTCACTGTCGTTTTTTGTTCGGGTTGGCTTCTGGTACTCGGAAACCTTTAAGATAGGTGAACAAGTTGCACGTCTAATTTCCCTCTAAATTATTCTTTACATTCAGCGAACGTGTCCAATTCTTGGAGTTTCATTTCTTTTATTTTTACATCTCTTAAAACCTATTATTACATTCCATTTATTTATTAGTTTTTGCTTGTTTATATATAAAGTGGGACATACTACTTACAAACAAC]

[+] EMBL CD146596             [ATTATCATCAAATACTCAACTAGACAATAACAAAAACAACCCAATAAAACGTACAGATTCTACACAACAATTAAGAAAAGATTCCATTGATCGAAAATCTTCTATGCTAGCTGAAATTCAACGTCGTATACAAGCTAGACGACAATTAATCGATGCTGCTGAAGAAGAATGTGGTTCGCCTAGAAAAGACCATCATTTAGAATCATCAAAATCTATCTCTGTGTCTTCTGAGAATACCGGTGGTATATCGACTAATTTGATCGACTCATCATTGAATAGCCGAAACGTTAGTACACCTAATTGTTCCACAACATCAAATATTATAAATTCTGATTTATCATTGACTCGGTCAGAATTGGATAATTTACGCCGTGAAATTATTGTTGAACTACGCAAAGAAGTTCAGTTGGCGAAAAATGAAATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGTCTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCTTATGCTATTTCACACATGATACAATCCCACCACCc                                                                                                                                                                                                                                                                          ]
[+] EMBL CD146591             [ATTATCATCAAATACTCAACTAGACAATAACAAAAACAACCCAATAAAACGTACAGATTCTACACAACAATTAAGAAAAGATTCCATTGATCGAAAATCTTCTATGCTAGCTGAAATTCAACGTCGTATACAAGCTAGACGACAATTAATCGATGCTGCTGAAGAAGAATGTGGTTCGCCTAGAAAAGACCATCATTTAGAATCATCAAAATCTATCTCTGTGTCTTCTGAGAATACCGGTGGTATATCGACTAATTTGATCGACTCATCATTGAATAGCCGAAACGTTAGTACACCTAATTGTTCCACAACATCAAATATTATAAATTCTGATTTATCATTGACTCGGTCAGAATTGGATAATTTACGCCGTGAAATTATTGTTGAACTACGCAAAGAAGTTCAGTTGGCGAAAAATGAAATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGTCTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCTTATGCTATTTCACACATGATACAATCCCACCACC                                                                                                                                                                                                                                                                           ]
[+] EMBL CD119926             [                                                                                                                                                                                                                                                                                                                             ATATTATAAATTCTGATTTATCATTGACTCGGTCAGAATTGGATAATTTACGCCGTGAAATTATTGTTGAACTACGTAAAGAAGTTCAGTTGGCGAAAAATGAAATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGTCTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCTTATGCTATTTCACACATGATACAATCCCACCACCAAATTGAAATTTACAATAACCTGTTTGCTTGTTCACTGTCGTTTTTTGTTCGGGTTGGCTTCTGGTACTCGGAAACCTTTAAGATAGGTGAACAAGTTGCACGTCTAATTTCCCTCTAAATTATTCTTTACATTCAGCGAACGTGTCCAATTCTTGGAGTTTCATTTCTTTTATTTTTACATCTCTTAAAACCTATTATTACATTCCATTTATTTATTAGTTTTTGCTTGTTTATATATAAAGTGGGACATACTACTTACAAACAAC]
[+] EMBL CD083782             [                                                                                                                                                                                                                                                                                                                                                                                  CGTGAAATTATTGTTGAACTACGTAAAGAAGTTCAGTTGGCGAAAAATGAAATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGTCTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCTTATGCTATTTCACACATGATACAATCCCACCACCAAATTGAAATTTACAATAACCTGTTTGCTTGTTCACTGTCGTTTTTTGTTCGGGTTGGCTTCTGATACTCGGAAACCTTTAAGATAGGTGAACAAGTTGCACGTCTAATTTCCCTCTAAATTATTCTTTACATTCAGCGAACGTGTCCAATTCTTGGAGTTTCATTTCTTTTATTTTTACATCTCTTAAAACCTATTATTACATTCCATTTATT                                                     ]




>consensus_7020#0
ATTATCATCAAATACTCAACTAGACAATAACAAAAACAACCCAATAAAACGTACAGATTC
TACACAACAATTAAGAAAAGATTCCATTGATCGAAAATCTTCTATGCTAGCTGAAATTCA
ACGTCGTATACAAGCTAGACGACAATTAATCGATGCTGCTGAAGAAGAATGTGGTTCGCC
TAGAAAAGACCATCATTTAGAATCATCAAAATCTATCTCTGTGTCTTCTGAGAATACCGG
TGGTATATCGACTAATTTGATCGACTCATCATTGAATAGCCGAAACGTTAGTACACCTAA
TTGTTCCACAACATCAAATATTATAAATTCTGATTTATCATTGACTCGGTCAGAATTGGA
TAATTTACGCCGTGAAATTATTGTTGAACTACGCAAAGAAGTTCAGTTGGCGAAAAATGA
AATTATGGATTGTATCAAATTGTATAAAGCTGTTTAACCTGGGCTATGCGCTCGCTTGGT
CTTTGTGCACGTTATTGGATAAACACAGCTGTCCTGAAAATATTGAAAACTTGATCAGCT
TATGCTATTTCACACATGATACAATCCCACCACCAAATTGAAATTTACAATAACCTGTTT
GCTTGTTCACTGTCGTTTTTTGTTCGGGTTGGCTTCTGGTACTCGGAAACCTTTAAGATA
GGTGAACAAGTTGCACGTCTAATTTCCCTCTAAATTATTCTTTACATTCAGCGAACGTGT
CCAATTCTTGGAGTTTCATTTCTTTTATTTTTACATCTCTTAAAACCTATTATTACATTC
CATTTATTTATTAGTTTTTGCTTGTTTATATATAAAGTGGGACATACTACTTACAAACAA
C

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)