cluster # 7028

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Schistosoma mansoni
cluster # 7028 cluster # 7028 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7028#0 length = 537 sequences # 4

consensusID : consensus_7028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 537
fasta sequence

                              [GAACAAATCACTCATTATTCACTGAGTGA-TTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACG-AATATTTG-AAATATACATCTCCTAGA-TGCAACTTCTATCCAACTTTTTA-TTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGATA-TACGAAGTTT-AATAGGCCGTATATTTCAC-TAGCATT-ATC-ATC-ATTC-AATC-ATATTGGGGTTAGACAATAGTCAC-TAAAAA-CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAA-CCGCC-TTCAACCTGCTAACCACATTTT-TCT-TCT--CTTCT-TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG-ATAATTGTATCTTC]

[+] EMBL CD120002             [GAACAAATCACTCATTATTCACTGAGTGATTTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACGAAATATTTGAAAATATACATCTCCTAGACTGCAACTTCTATCCAACTTTTTACTTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGACACTACGAAGTTTAAATAGGCCGTATATTTAACTTAGCATTAATCAATCAATTCAAATCAATATTGGGGTTAGACAATAGTCACTTAAAAACCCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTT                                                                                                                                                                                                                                ]
[+] EMBL CD120429             [ AATAAATCACTCATTATTCACTGAGTGA TTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACG AATATTTG AAATATACATCTCCTAGA TGCAACTTCTATCCAACTTTTTA TTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TANAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAACCCGCCTTTCAACCTGCTAA CACATTTT TCT TCT  CTNCTCTAAAAGGTATTTTCTTCTATATCNATTCATTCGCTGCTGTCA CAACTGNTACTAACTGGATGACAGACGTGTTACACGAATAATTGTATCTTC]
[-] EMBL CD120061             [                                                                                                                                                                            tanTTAGTCTTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TAAAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCCTGTTACAGTTTAGACGAGAAGTTGGGAATGCTGGAACACCTTAGTATCTTTAG AAAATAATTCTAATTTTTCAGTCTCACAGAAA CCGCC TTCAACCTGCTAACCACATTTTCTATATCT  CTTCT TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG ATAATTGTATCTTC]
[-] EMBL CD120093             [                                                                                                                                                                                     TTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TAAAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAA CCGCC TTCAACCTGCTAACCACATTTT CTT TCTCCCTTCT TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG ATAATTGTATCTTC]




>consensus_7028#0
GAACAAATCACTCATTATTCACTGAGTGATTTTTGCAGCTACTCCTTTCTGCATCTACTT
AATTTACACATTCACTTGTTCAGTTTATCCACTCACACGAATATTTGAAATATACATCTC
CTAGATGCAACTTCTATCCAACTTTTTATTTCTCTGTTGTAGTAACGTTATTAGTCTTCA
GAAGATATACGAAGTTTAATAGGCCGTATATTTCACTAGCATTATCATCATTCAATCATA
TTGGGGTTAGACAATAGTCACTAAAAACCTTTGACTTGTAGAGTAGTATGGTGTTGTGGT
TTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACC
TTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAACCGCCTTCAACCTG
CTAACCACATTTTTCTTCTCTTCTTAATAGTTATTTTCTTCTATATCATTTCATTCGCTG
CTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACGATAATTGTATCTTC

clustalw multiple alignements is not computed in this case