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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7261 cluster # 7261       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7261#0 length = 773 sequences # 5  

consensusID : consensus_7261#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 773
fasta sequence
                              [CCTCCAGGCCAGAATTTGGCACGAGGACGACCTTATCCCTCTGGCGTCGAGGAAATGCCAGTACGGCAACGTCCGGAACGCGATTCACGTCTGCCTGGTGCACATTATCCAAATCCATCTGTTGACGAACTGCACAGAGTTGGCAATCCTGAAAGTCGGCGTACTGCTGTTAGTCAGTTCAATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACACCTCATGGTTTAGAAATGATCGATTTCAGGAGCCGATCACCTCATGCAGATGTTGACATATTGCCTAAAATTATTCGCCTTGATCGCGAACAATACCGCAGAGTGAACTACGACGTACCAGATGTCAGTGTTTGTGAGAAATCATCAGCTGATTTGACAGTGGTTGACACTACAGATAGTTTTGGTGCTAAGCGTGCTCGTAGTCGTCATCGTAGCAGAGGACCTGGTGTAACTATTGATCGATCTGAACCATTTGAGTCAGATACAGGAAGTTTTGCTGCAGAACAACGTCTTAGAAAGCTTCGCGAGCGTTTGAACTTAGTTGATGATGCTATCGCAGAAATTAAAGCCGGTACTGGGGTACAATCCAATTTTAATTTTGGCGATATTCGAAGATGATAAAAACTAGCGTAGTTATTAATCGAATCATCAACATGTACATTGTTGTCCCCATTTCATTTCTTTCTGCACAAAAGACAACTCACTATATTTATTCCCTT-CCNCATCTTGTCT-AGTCAAATTG-TTGTATCGNG-TTTTCCTAT-AAATATAGTCAG]

[+] EMBL CD080647             [CCTCCAGGCCAGAATTTGGCACGAGGACGACCTTATCCCTCTGGCGTCGAGGAAATGCCAGTACGGCAACGTCCGGAACGCGATTCACGTCTGCCTGGTGCACATTATCCAAATCCATCTGTTGACGAACTGCACAGAGTTGGCAATCCTGAAAGTCGGCGTACTGCTGTTAGTCAGTTCAATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACACCTCATGGTTTAGAAATGATCGATTTCAGGAGCCGATCACCTCATGCAGATGTTGACATATTGCCTAAAATTATTCGCCTTGATCGCGAACAATACCGCAGAGTGAACTACGACGTACCAGATGTCAGTGTTTGTGAGAAATCATCAGCTGATTTGACAGTGGTTGACACTACAGATAGTTTTGGTGCTAAGCGTGCTCGTAGTCGTCATCGTAGCAGAGGACCTGGTGTAACTATTGATCGATCTGAACCATTTGAGTCAGATACAGGAAGTTTTGCTGCAGAACAACGTCTTAGAAAGCTTCGCGAGCGTTTGAACTTAGTTGATGATGCTATCGCAGAAATTAAAGCCGGTACTGGGGTACAATCCAATTTTAATTTTGGCGATATTCGAAGATGATAAAAACTAGCGTAGTTATTAATCGAATCATCAACATGTACATTGTTGTCCCCATTTCATTTCTTTCTGCACAAAAGACAACTCACTATATTTATTCCCTT CCNCATCTTGTCT AGTCAAATTG TTGTATCGNG TTTTCCTAT AAATATAGTC  ]
[+] EMBL AI110948             [                                                         CCAGTACGGCAACGTCCGGAACGCGATTCACGTCTGCCTGGTGCACATTATCCAAATCCATCTGTTGACGAACTGCACAGAGTTGGCAATCCTGAAAGTCGGCGTACTGCTGTTAGTCAGTTCAATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACACCTCATGGTTTAGAAATGATCGATTTCAGGAGCCGATCACCTCATGCAGATGTTGACATATTGCCTAAAATTATTCGCCTTGATCGCGATCAATACCGCAGAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI111099             [                                                         CCAGTACGGCAACGTCCGGAACGCGATTCACGTCTGCCTGGTGCACATTATCCAAATCCATCTGTTGACGAACTGCNCAGAGTTGGCAATCCTGAAAGTCGGCGTACTGCTGTTAGTCAGTTCAATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACNCCTCATGGTTTAGAAATGATCGATTTCAGGAGCCGATCACCTCATGCNGATGTTGACATNTTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD074560             [                                                                                                                                                                  ACTGCTGTTAGTCAGTTCAATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACACCTCATGGTTTAGAAATGATCGATTTCAGGAGCCGATCACCTCATGCAGATGTTGACATATTGCCTAAAATTATTCGCCTTGATCGCGAACAATACCGCAGAGTGAACTACGACGTACCAGATGTCAGTGTTTGTGAGAAATCATCAGCTGATTTGACAGTGGTTGACACTACAGATAGTTTTGGTGCTAAGCGTGCTCGTAGTCGTCATCGTAGCAAAGGACCTGGTGTAACTATTGATCGATTTGAACCATTTGAGTCAGATACAGGAAGTTTTGCTGCAGAACAACGTTTTAGAAAGCTTCGCGAGCGTTTGAACTTAGTTGATGATGCTATCGCAGAAATTAAAGCCGGTACTGGGGTACAATCCAATTTTAATTTTGGCGATATTCGAAGATGATAAAAACTAGCGTAGTTATTAATCGAATCATCAACATGTACATTGTTGTCCCCATTTCATTTCTTTTTGCACAAAAGACAACTCACTATATTTATTCCCTTCCCCCATCTTGTTTAAGTC AATTGTTTGTATGGTGTTTTTCCTATCAAAAATAGTCAG]
[+] EMBL CD138055             [                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTAGCAGAATACCATGTGTAACTATTGATCGATCTGAACCATTTGAGTCAGATACAGGAAGTTTTGCTGCAGAACAACGTCTTACAAAGCTTCGCGAGCGTTTGAACTTATTTGATGATGCTATCGCACACATCAAAGCCGGTA                                                                                                                                                                                                            ]


>consensus_7261#0 CCTCCAGGCCAGAATTTGGCACGAGGACGACCTTATCCCTCTGGCGTCGAGGAAATGCCA GTACGGCAACGTCCGGAACGCGATTCACGTCTGCCTGGTGCACATTATCCAAATCCATCT GTTGACGAACTGCACAGAGTTGGCAATCCTGAAAGTCGGCGTACTGCTGTTAGTCAGTTC AATATGTCAACTAAGGAGAGAATAATCAGACCGAGAACACCTCATGGTTTAGAAATGATC GATTTCAGGAGCCGATCACCTCATGCAGATGTTGACATATTGCCTAAAATTATTCGCCTT GATCGCGAACAATACCGCAGAGTGAACTACGACGTACCAGATGTCAGTGTTTGTGAGAAA TCATCAGCTGATTTGACAGTGGTTGACACTACAGATAGTTTTGGTGCTAAGCGTGCTCGT AGTCGTCATCGTAGCAGAGGACCTGGTGTAACTATTGATCGATCTGAACCATTTGAGTCA GATACAGGAAGTTTTGCTGCAGAACAACGTCTTAGAAAGCTTCGCGAGCGTTTGAACTTA GTTGATGATGCTATCGCAGAAATTAAAGCCGGTACTGGGGTACAATCCAATTTTAATTTT GGCGATATTCGAAGATGATAAAAACTAGCGTAGTTATTAATCGAATCATCAACATGTACA TTGTTGTCCCCATTTCATTTCTTTCTGCACAAAAGACAACTCACTATATTTATTCCCTTC CNCATCTTGTCTAGTCAAATTGTTGTATCGNGTTTTCCTATAAATATAGTCAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)