These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7300#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 402 fasta sequence [GCTTTAAC-AATCAAGCTACCACTAACGTGATGATTCTTCA-GGAATCCTAGTATAAGTGACTAGGATC-AATTT-AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC-AATTCATTTTAGGACAACGTGAATAATG-ATTAG-AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA] [+] EMBL CD120043 [GCTTTAAC AATCCAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTTTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAG ] [+] EMBL CD120008 [GCTTTAACAAATCAAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATCAAATTTAAAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATCAAATTAATTTTAGGACAACGTGAAAAATGAATTAGAAAACTAGAACAAGCTATTTTGGTGAAATTca ] [-] EMBL CD120368 [ CTTNAAC AATCAAGCTACCACTAACGTGATGATTCTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTTTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA] [-] EMBL CD120081 [ cTTAAC AATCAAGCTACCACTAACGTGATGATTC TCAGGGGATCNTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCCAATGAATGAAGAGAATATGATAATC AA TCATTTTAGGGCAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA] [-] EMBL CD120469 [ GATCTTTCA GGAATCCTAGTATAAGTGACTAGGATC AATTT AAACTAACCTCACAAGCCAAATGAATGAAGAGAATATGATAATC AATTCATTNTAGGACAACGTGAATAATG ATTAG AAACTAGAACAAGCTATTTTGGTGAATTTAATAGTACTATCTATAGTAAACTAACTGAATGGGAGAGATCAGAAAATGGGGCGACCAAGAGTTTATTAAAAGACTGGTTAAAAGAAATACGAAAATACGCTAGGTGAAAATTACTAGAGATAAATATTAACGCCCAACCATATCGAGATAACAATAAAACTGTAACTGCACAATCACAAAGGAATTGGGTATTGACGAACCAGAAAGTCGATATGGTATGAGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||