These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7339#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 813 fasta sequence [TGGGCGGTCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTGGAATTTCCGGCAACTTGCTTGTACTCGGAATTGCTTTGGTTTACCACTCGTCGACCGGACCAATCAGCTACAGCATTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTACTTTTGAATTTTCTAAATTACCTTGAACGCGTTATTTTTAATGCAACTAATGGTTTTGCAATTACACTTTCTCATCCATCAACATCTGCTTCTATATTTTTCACCGCAAATGAAAACACTTGTACACAGTGGTTTAATCGTATTCGAACTCTTCTCGTTCGTATCTCAAGTGACTTGCCGTTAGTGT] [+] EMBL CD130752 [TGGGCGGTCCGCGGGNAATTCGATTACTGCGAACCGGCTTCTTGGAATTTCCGGCAACTTGCTTGTACTCGGAATTGCTTTGGTTTACCACTCGTCGACCGGACCAATCAGCTACAGCATTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTC ] [+] EMBL CD064122 [ TTATTACCAGTATCTAGTGTAAACGATTCCGACAGTAGTCATAACAATCTAATAACTATGACTACCGCTTTTCCCAGTCTGCCAGCTGTTGCGGGTATTTTGGGCATTTTGACACGTGGAGCTCCATACACTCAAAAAGTGGAGAGCAGTCGACTAAAGATTTTAAAGAGTCCCATTGATTGGATTCGACGTTTATCATACTTAGTTTCTCCACTTCCATCGGATAGAAAGTATGATTTTTCATTGTTACAGTGCACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCAACAAAAGAAGAAa ] [-] EMBL CD159017 [ CACTAGTTTCATTCAACCTGTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAGCTATTATCCAGCCAATTTATTCCAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTACTTTTGAATTTTCTAAATTACCTTGAACGCGTTATTTTTAATGCAACTAATGGTTTTGCAATTACACTTTCTCATCCATCAACATCTGCTTCTATATTTTTCACCGCAAATGAAAACACTTGTACACAGTGGTTTAATCGTATTCGAACTCTTCTCGTTCGTATCTCAAGTGACTTGCCGTTAGTGT] [-] EMBL CD158587 [ GTTTTATGGCATACTGCATGGGCAATGGTTGATTATAAGTTGAAAGTAGCCCCTTGGGCTAACCCGCTGAAAACTTTCTTCTCTCTTGAAGGAACTCTAAGAG ] [-] EMBL CD166845 [ CAACGATTCTTCTAATAACAATCAGTCCTCAATCATTTCATTCCATATGGCATCTTCAGAAGCTCTCTCTCACCAAAAGAAGAACCGACATTTAAACCAGATCCACTTAC TTTGAATTTTCTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||