These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7420#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 600 fasta sequence [AGTTCGCTCGCAAGAAAGCCTGACAAACTTACTATTTTGAGGATGGCTGTGAGCCACATGAAATCGATACGAGGAACTGGAAGTACAACATCTGATGGATCATACAAACCTTCATTCCTTTCGGATCAAGAACTCAAGCATTTGGTTTTGGAAGCTGCGGATGGATTTCTTTTTGTTTGTCAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTTATGTCACCCGGATGATGCAGAGAAAATATGTGAACAACTTACTGGATCTATATTACCGTCACAAGGTGCTAGTATTTTAGGTCTCACAGGTCAAGCTTC-G-TATCTACTTTATCGAATAGTAATTCGACCAATCTAACCAAACAAACCGCGGGATCAGATCTTAAAATGGGTCCTGTCGCATCTGATCTCTCCCCTACATCAGTATCTGATCTGGTATCTACCCATATATGCGCTTCCCAACGCCGTAATTCTCCAGCAAATTTGACTAATAATATTTGTTCGTCACCTGTTCCTGGGCGTATACTAGATTTAAAATCTGGTA] [-] EMBL CD068449 [AGTTCGCTCGCAAGAAAGCCTGACAAACTTACTATTTTGAGGATGGCTGTGAGCCACATGAAATCGATACGAGGAACTGGAAGTACAACATCTGATGGATCATACAAACCTTCATTCCTTTCGGATCAAGAACTCAAGCATTTGGTTTTGGAAGCTGCGGATGGATTTCTTTTTGTTTGTCAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTTATGTCACCCGGATGATGCAGAGAAAATATGTGAACAACTTACTGGATCTATATTACCGTCACAAGGTGCTAGTATTTTAGGTCTCACAGGTCAAGCTTC GTTATCTACTTTATCGAATAGTAATTC ] [+] EMBL CD117989 [ AAGCATTTGGTTTTGGAAGCTGCGGATGGATTTCTTTTTGTTTGACAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTTATGTCACCCCGATGACGCAGAG AAATATGTGAAC ACTTACTGGATCTATA TACCGTCACAAGGTGCTAGTATTTTAGG CTCACAGGTCAAGCTTC G TATCTCCTTTATCGAATAGTAATTCGACCAATCTAACCAAACAAACCGCGGGATCAGATCTTAAAATGGGTCCTGTCGCATCTGATCTCTCCCCTACATCAGTATCTGATCTGGTATCTACCCATATATGCGCTTCCCAACGCCGTAATTCTCCAGCAAATTTGACTAATAATATTTGTTCGTCACCTGTTCCTGGGCGTATACTAGATTTAAAATCTGGTA] [-] EMBL CD111876 [ GATTTCTTNTTGTTTGTCAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTCATGTCACCCGGATGATGCAGAGAAAATATGTGAACAACTTACTGGATCTATATTACCGTCACAAGGTGCTAGTATTTTAGGTCTCACAGGTCAAGCTTCAT TATCTACTTTATCGAATAGTAATTCGACCAATCTAACCAAACAAACCGCTGGATCAGATCTTAAAATGGGT ] [+] EMBL CD094787 [ CTTTTTGTTTGTCAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTTATGTCACCCGGATGATGCAGAGAAAATATGTGAACAACTTACTGGATCTATATTACCGTCACAAGGTGCTAGTATTTTAGGTCTCGCAG ] [+] EMBL CD095221 [ CTTTTTGTTTGTCAATGTGATACTGGAAGAATCATCTATGTATCTGACAGTGTAACATCCGTGCTCAATCAAACTCAGTCAGAATGGTATCAGCATACGCTATACGAGTTATGTCACCCGGATGATGCAGAGAAAATATGTGAACAACTTACTGGATCTATATTACCGTCACAAGGTGCTAGTATTTTAGGTCTCGCAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||