These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7459#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 662 fasta sequence [AACAACAACTACTAATGGCATCAAGAATCATGATCGCCTAGATCCATTTGCAGATTTTGCTGATGTACTTCGAGATCGATTAAACAGTCAAAATTGTTCCAGTACCAATGCCACAAATGGTGATAATACATATACTCCACCATCATCAAATAGATCGTCCACAAACTGGGGTGGTTTCTCTGCTGGTCCCAGTCCAGCACATCATTTTAAATCTAGTGTCGACTCAAAGTTTATGAACGACTCTTCAAATCATAAAGAAAGTTCTGATAATTTATTCCACGGTTATGAGAAATCTAGTCAATCACATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACC-TCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTG-GGTTTGGTTCTTCTCGAACAAACAACACAGATGATAATAAACAACCAAAAACAGTTAATCAGATTCGTCGTGAAAAAATGGCTAAAACTATCGATCCAGAGCAATTGAAAGTCTTTGATTGGGCTGAGGGTAAAGATCGAAATCTTAGAGCATTATTATGTTCACTACCGGCCATATTATGGGATGGAGCACAATGGAATCATGTTGGTATGGCTGATCTAATAACGCGGGATC] [+] EMBL CD112761 [AACAACAACTACTAATGGCATCAAGAATCATGATCGCCTAGATCCATTTGCAGATTTTGCTGATGTACTTCGAGATCGATTAAACAGTCAAAATTGTTCCAGTACCAATGCCACAAATGGTGATAATACATATACTCCACCATCATCAAATAGATCGTCCACAAACTGGGGTGGTTTCTCTGCTGGTCCCAGTCCAGCACATCATTTTAAATCTAGTGTCGACTCAAAGTTTATGAACGACTCTTCAAATCATAAAGAAAGTTCTGATAATTTATTCCACGGTTATGAGAAATCTAGTCAATCACATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACC TCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTGNGGTTTGGTTCTTCTCGAACAAACAACACAGATGATTATt ] [+] EMBL CD112725 [AACAACAACTACTAATGGCATCAAGAATCATGATCGCCTAGATCCATTTGCAGATTTTGCTGATGTACTTCGAGATCGATTAAACAGTCAAAATTGTTCCAGTACCAATGCCACAAATGGTGATAATACATATACTCCACCATCATCAAATAGATCGTCCACAAACTGGGGTGGTTTCTCTGCTGGTCCCAGTCCAGCACATCATTTTAAATCTAGTGTCGACTCAAAGTTTATGAACGACTCTTCAAATCATAAAGAGAGTTCTGATAATTTATTCCACGGTTATGAGAAATCTAGTCAATCACATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACC TCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTG GGTTTGGTTCTTCTC ] [-] EMBL CD123146 [ TATGAACGACTCCTCAAATCATAAAGAAAGTTCTGATAATTTATTCCACGGTTATGAGAAATCTAGTCAATCACATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACCTTCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTG GGTTTGGTTCTTCTCGAACAAACAACACAGAT ] [-] EMBL CD187952 [ TAAAGAGAGTTCTGATAATTTATTCCACGGTTATGAGAAATCTAGTCAATCATATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACC TCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTG GGTTTGGTTCTTCTCGAACAAACAACACAGATGATAATAAACAACCAAAAACAGTTAATCAGATTCGTCGTGAAAAAATGGCTAAAACTATCGATCCAGAGCAATTGAAAGTCTTTGATTGGGCTGAGGGTAAAGATCGAAATCTTAGAGCATTATTATGTTCACTACCGGCCATATTATGGGATGGAGCACAATGGAATCATGTTGGTATGGCTGATCTAATAACGCGGGATC] [-] EMBL CD187980 [ CACGGTTATGAGAAATCTAGTCAATCATATTCTTCCTACTCCAATTTTCCTAATACTACCACTACTACTGGATCAACATCAATACCAAATAGTGGAGGAACTGGTGCTAGACC TCATGTCAATAAAGATGCATTTTCTGATTTACTTGGTG GGTTTGGTTCTTCTCGAACAAACAACACAGATGATAATAAACAACCAAAAACAGTTAATCAGATTCGTCGTGAAAAAATGGCTAAAACTATCGATCCAGAACAATTGAAAGTCTTTGATTGGGCTGAGGGTAAAGATCGAAATCTTAGAGCATTATTATGTTCACTACCGGCCATATTATGGGATGGAGCACAATGGAATCATGTTGGTATGGCTGATCTAATAACGCGGGATC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||