Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7519 cluster # 7519       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7519#0 length = 905 sequences # 5  
consensusID : consensus_7519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 905
fasta sequence 
                              [GGGGTTATTCTGGTCTTCTTGATTGGTTGGTTGTACATGTTAGACATATATCAAGTTTTTTAATACTATCTGACGGATTTTTTTGTTTCGACACGTCATTGTAATGCCACAACATCGAAAACAAGTAAACGACAATTGTAATGTTCTAAACCAACCACTTCCCCGTGTAATTCACAGACCAATCCCAATTACTGCGTCATCTGTTGTACTTTCACCTTTCGAACTAGTCACTCCTAGAATGCCTGTACGAACTGTGGCCGATCCACCGGAAATGGTCCCGTCTAGTCACTGGTTTCACGGAAATATTAGTCGGGAGGACACTGAGAGACTTCTGAAACATCATTTACAAAATGGGACTTTTCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGNGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTCCACATATTACTGTTTATGGAGTAACCAATGATTTACATCATGCCGTAAGGAAAGCAAATCTTAAGGGTGTTCGTGACCTCTTCACACGTGTCAGTTCAATGGAAGTAACAAGTTTGTCGGATTATGTGAATGAAAAATCAGCTGACAGTGGCGCTACTCCATTAATCGAAGCTGCCAAAACAGGCTCTAATGATATTGTCCGGCTTTTATTAGAGCACAATGCGTCTGTAAATTTAAGAGACTGTGGTGGATTCACAGCACTTCATCGTGCATGTCAAAAAAGTTTTGCACATGTTGCTGAAACTCTTTCAAGAGTCGGCC]

[+] EMBL CD123476             [GGGGTTATTCTGGTCTTCTTGATTGGTTGGTTGTACATGTTAGACATATATCAAGTTTTTTAATACTATCTGACGGATTTTTTTGTTTCGACACGTCATTGTAATGCCACAACATCGAAAACAAGTAAACGACAATTGTAATGTTCTAAACCAACCACTTCCCCGTGTAATTCACAGACCAATCCCAATTACTGCGTCATCTGTTGTACTTTCACCTTTCGAACTAGTCACTCCTAGAATGCCTGTACGAACTGTGGCCGATCCACCGGAAATGGTCCCGTCTAGTCACTGGTTTCACGGAAATATTAGTCGGGAGGACACTGAGAGACTTCTGAAACATCATTTACAAAATGGGACTTTTCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGNGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTCCACATATTACTGTNTATGGAGTAACCAATGATTTACATCATG                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD123460             [GGGGTTATTCTGGTCTTCTTGATTGGTTGGTTGTACATGTTAGACATATATCAAGTTTTTTAATACTATCTGACGGATTTTTTTGTTTCGACACGTCATTGTAATGCCACAACATCGAAAACAAGTAAACGACAATTGTAATGTTCTAAACCAACCACTTCCCCGTGTAATTCACAGACCAATCCCAATTACTGCGTCATCTGTTGTACTTTCACCTTTCGAACTAGTCACTCCTAGAATGCCTGTACGAACTGTGGCCGATCCACCGGAAATGGTCCCGTCTAGTCACTGGTTTCACGGAAATATTAGTCGGGAGGACACTGAGAGACTTCTGAAACATCATTTACAAAATGGGACTTTTCTTATTAGATCCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGNGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTTCACATATTACTGTTTATGGAGTAACCAATGATTTACATCA                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD123522             [GGGGTTATTCTGGTCTTCTTGATTGGTTGGTTGTACATGTTAGACATATATCAAGTTTTTTAATACTATCTGACGGATTTTTTTGTTTCGACACGTCATTGTAATGCCACAACATCGAAAACAAGTAAACGACAATTGTAATGTTCTAAACCAACCACTTCCCCGTGTAATTCACAGACCAATCCCAATTACTGCGTCATCTGTTGTACTTTCACCTTTCGAACTAGTCACTCCTAGAATGCCTGTACGAACTGTGGCCGATCCACCGGAAATGGTCCCGTCTAGTCACTGGTTTCACGGAAATATTAGTCGGGAGGACACTGAGAGACTTCTGAAACATCATTTACAAAATGGGACTTTTCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGNGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTTCACA                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD123505             [                                                                                                                                                                                                                                                                                                                                               AACATCATTTACANAATGGGACTTTTCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGGGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTCCACATATTACTGTTTATGGAGTAACCAATGATTTACATCATGCCGTAAGGAAAGCAAATCTTAAGGGTGTTCGTGACCTCTTCACACGTGTCAGTTCAATGGAAGTAACAAGTTTGTCGGATTATGTGAATGAAAAATCAGCTGACAGTGGCGCTACTCCATTAATCGAAGCTGCCAAAACAGGCTCTAATGATATTGTCCGGCTTTTATTAGAGCACAATGCGTCTGTAAATTTAAGAGACTGTGGTGGATTCACAGCACTTCATCGTGCATGTCAAAAAAGTTTTGCACATGTTGCTGAAACTCTTTCAAGAGTCGGCC]
[-] EMBL CD123504             [                                                                                                                                                                                                                                                                                                                                               AACATCATTTACAAAATGGGACTTTTCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCAGCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAATGCTAAATACCTGGGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCATAGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTCCACATATTACTGTTTATGGAGTAACCAATGATTTACATCATGCCGTAAGGAAAGCAAATCTTAAGGGTGTTCGTGACCTCTTCACACGTGTCAGTTCAATGGAAGTAACAAGTTTGTCGGATTACGTGAATGAAAAATCAGCTGACAGTGGCGCTACTCCATTAATCGAAGCTGCCAAAACAGGCTCTAATGATATTGTCCGGCTTTTATTAGAGCACAATGCGTCTGTAAACTTAAGAGACTGTGGTGGATTCACAGCACTTCATCGTGCATGTCAAAAAAGTTTTGCACATGTTGCTGAAACTCTTTTAAGAGTCGGCC]




>consensus_7519#0
GGGGTTATTCTGGTCTTCTTGATTGGTTGGTTGTACATGTTAGACATATATCAAGTTTTT
TAATACTATCTGACGGATTTTTTTGTTTCGACACGTCATTGTAATGCCACAACATCGAAA
ACAAGTAAACGACAATTGTAATGTTCTAAACCAACCACTTCCCCGTGTAATTCACAGACC
AATCCCAATTACTGCGTCATCTGTTGTACTTTCACCTTTCGAACTAGTCACTCCTAGAAT
GCCTGTACGAACTGTGGCCGATCCACCGGAAATGGTCCCGTCTAGTCACTGGTTTCACGG
AAATATTAGTCGGGAGGACACTGAGAGACTTCTGAAACATCATTTACAAAATGGGACTTT
TCTTATTAGATTCAGCATATCGACTCACAAATATGTTCTGAGCGTCATTTACAATCAGCA
GCTGTATCATTATCCAATAGAAGAATTGTCCGATGGATTTTATCAGGTTAATGGGACGAA
TGCTAAATACCTGNGTATTGACCTACTTGTATCAGAGTTCAGGCGTGCAAATAACTGCAT
AGTTTGCTCTTTAGGGAAGCCTGTGCCAGGTCTCCGACCGCCTCCACATATTACTGTTTA
TGGAGTAACCAATGATTTACATCATGCCGTAAGGAAAGCAAATCTTAAGGGTGTTCGTGA
CCTCTTCACACGTGTCAGTTCAATGGAAGTAACAAGTTTGTCGGATTATGTGAATGAAAA
ATCAGCTGACAGTGGCGCTACTCCATTAATCGAAGCTGCCAAAACAGGCTCTAATGATAT
TGTCCGGCTTTTATTAGAGCACAATGCGTCTGTAAATTTAAGAGACTGTGGTGGATTCAC
AGCACTTCATCGTGCATGTCAAAAAAGTTTTGCACATGTTGCTGAAACTCTTTCAAGAGT
CGGCC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)