Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7656 cluster # 7656       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7656#0 length = 1129 sequences # 5  
consensusID : consensus_7656#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1129
fasta sequence 
                              [AACAGGGAAAGTTCAGGATCGTCATTGTCTTCTTCACTCGTTGGTTTCGTCCAACTCTGAGTGGCGTGAATGGGCGAGACCACTTCCTCGTTCGAAACGCCCTCAACACATAAGTCCATAGTTTGTCTGTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACACGCTGTCTGTCGCTTGAGTCTCCACACTCACAAGTCTGGTCGGAGAACCAACCGACACACTAGGCTTGTGCTCGTCGTGTATGCATTCTGAGGAGTAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAAAGTGACATGAGAACTGAAATGCCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGCAAAGACGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAGCGACTACTCCTCAGAATGCACACTGCTGCTGTGGAGGAGGAGTGTGTGCAGACGGAGATTGAGGACGACGTTTATGACCTAGTGTCGTCTCTGCAGGTCGAGGTTGCCCATCTGCGTGAGGAAAATGCGGCGACGTTGACGGCTCTGGAGCGTTCACAGCTCGAGTTGATGATGAAACAGACCGAAGTGCAGGAACTGGAGTCACGTATCGTGGTGAACGAGAGGACTTGGTCGATTCCTTGTGAGACTGTGGGAAAGGCACCCGATGTGGTTGTCGGTGAGTTGGCAGAGGTTGATGACACGGACAGAGTGGAGGCAGACGTGTTTGCTGGAGTTCCTGACAAGAAGCTGGTGGGGACTGTTGCAGGTGACTCAGTGTCAGGCATTGTGCACGACCGAATGGACAGACAAACTATGGACTTATGTGTTGAGGGAGACTGTGGAGGCAGAACGACGTGATTTGGACATTATGCGTGCCAATGTGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGGAGTTGCGGATCTGAGAGAAGAGAAGTGTTATTTGCGAGACGAAGTGAATGAGTTGAG]

[+] EMBL CD161262             [AACAGGGAAAGTTCAGGATCGTCATTGTCTTCTTCACTCGTTGGTTTCGTCCAACTCTGAGTGGCGTGAATGGGCGAGACCACTTCCTCGTTCGAAACGCCCTCAACACATAAGTCCATAGTTTGTCTGTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACACGCTGTCTGTCGCTTGAGTCTCCACACTCACAAGTCTGGTCGGAGAACCAACCGACACACTAGGCTTGTGCTCGTCGTGTATGCATTCTGAGGAGTAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD191134             [                                                                                                                                                      CATGGTCGACTGGTCTACGGTCGACGGATAGGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACACGCTGTCTGTCGCTTGAGTCTCCACACTCACAAGTCTGGTCGGAGAACCAACCGACACACTAGGCTTGTGCTCGTCGTGTATGCATTCTGAGGAGTAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD063705             [                                                                                                                                                                                                                                                                                                                            agaTAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAAAGTGACATGAGAACTGAAATGCCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD160840             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGCAAAGACGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAGCGACTACTCCTCAGAATGCACACTGCTGCTGTGGAGGAGGAGTGTGTGCAGACGGAGATTGAGGACGACGTTTATGACCTAGTGTCGTCTCTGCAGGTCGAGGTTGCCCATCTGCGTGAGGAAAATGCGGCGACGTTGACGGCTCTGGAGCGTTCACAGCTCGAGTTGATGATGAAACAGACCGAAGTGCAGGAACTGGAGTCACGTATCGTGGTGAACGAGAGGACTTGGTCGATTCCTTGTGAGACTGTGGGAAAGGCACCCGATGTGGTTGTCG                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD164248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACAGCTCGAGTTGATGATGAAACAGACCGAAGTGCAGGAACTGGAGTCACGTATCGTGGTGAACGAGAGGACTTGGTCGATTCCTTGTGAGACTGTGGGAAAGGCACCCGATGTGGTTGTCGGTGAGTTGGCAGAGGTTGATGACACGGACAGAGTGGAGGCAGACGTGTTTGCTGGAGTTCCTGACAAGAAGCTGGTGGGGACTGTTGCAGGTGACTCAGTGTCAGGCATTGTGCACGACCGAATGGACAGACAAACTATGGACTTATGTGTTGAGGGAGACTGTGGAGGCAGAACGACGTGATTTGGACATTATGCGTGCCAATGTGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGGAGTTGCGGATCTGAGAGAAGAGAAGTGTTATTTGCGAGACGAAGTGAATGAGTTGAG]




>consensus_7656#0
AACAGGGAAAGTTCAGGATCGTCATTGTCTTCTTCACTCGTTGGTTTCGTCCAACTCTGA
GTGGCGTGAATGGGCGAGACCACTTCCTCGTTCGAAACGCCCTCAACACATAAGTCCATA
GTTTGTCTGTCTCGTCATCTCCACTGCACTCATGGTCGACTGGTCTACGGTCGACGGATA
GGTAAATCCTGAAGTTGACAATGTGTCAGTAGCCAACCAAGACACGCTGTCTGTCGCTTG
AGTCTCCACACTCACAAGTCTGGTCGGAGAACCAACCGACACACTAGGCTTGTGCTCGTC
GTGTATGCATTCTGAGGAGTAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTC
TTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAAAGTGACATGAGAACTGAAATGC
CAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAG
AGACTGTGAGCGTGGGCGTTGGCAAAGACGCAGAGGACGATGAGTCGAATTGCATGGTGG
TTGACGGTTGGAGCGACTACTCCTCAGAATGCACACTGCTGCTGTGGAGGAGGAGTGTGT
GCAGACGGAGATTGAGGACGACGTTTATGACCTAGTGTCGTCTCTGCAGGTCGAGGTTGC
CCATCTGCGTGAGGAAAATGCGGCGACGTTGACGGCTCTGGAGCGTTCACAGCTCGAGTT
GATGATGAAACAGACCGAAGTGCAGGAACTGGAGTCACGTATCGTGGTGAACGAGAGGAC
TTGGTCGATTCCTTGTGAGACTGTGGGAAAGGCACCCGATGTGGTTGTCGGTGAGTTGGC
AGAGGTTGATGACACGGACAGAGTGGAGGCAGACGTGTTTGCTGGAGTTCCTGACAAGAA
GCTGGTGGGGACTGTTGCAGGTGACTCAGTGTCAGGCATTGTGCACGACCGAATGGACAG
ACAAACTATGGACTTATGTGTTGAGGGAGACTGTGGAGGCAGAACGACGTGATTTGGACA
TTATGCGTGCCAATGTGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGGAGTTGCGG
ATCTGAGAGAAGAGAAGTGTTATTTGCGAGACGAAGTGAATGAGTTGAG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)