These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 540 fasta sequence [GAGCATTCACC-TGTCGAATGGATGTCATTCGA-GAAG-TAGAGTTC-AAGAAAGACAGCGACAGCAACCTCATCGTTCAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTAATCCAACTGCAACAC-CGTCTGTTGCTGCTAATAATCAAAACTTCCCAGTGCCATGGATGCCTCCTGCAAATGCATTTCCGTTTTACCCACCATTTATTCCTCCTACAAATAATTCAACAACTACACAAGCTCAGACTGTCTTTCCGTCTGTGCCTCCTTTATACATACCACCCTTTATGGGCATGCCTATAATATACCCTGGTAACTTGTTTTCTAATGGAAATACTCCTATGCCAGAACCTCCCTCTGGACTACCTGAACCAGCTGATGAGGCTCGTCTTCGTGCCAGTGCCGAAGCCCGTTTCACCGCTTTACGTCAAATAAATGTACTGTTGAATGCAGCTGTCCTGCAAATGAATGCTTACCTAAATGCGGCTAGCTCTCCCCCAAGTGAATCAGAACCTATGACTTC] [+] EMBL CD166843 [GAGCATTCACC TGTCGAATGGATGTCATTCGANGAAG TTGAGTTC AAGAAAGACAGCGACAGCAACCTCATCGTTCAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTAATCCAACTGCAACAC CGTCTGTTGCTGCTAATAATCAAAACTTCCCAGTGCCATGGATGCCTCCTGCAAATGCATTTCCGTTTTACCCACCATTTATTCCTCCTACAAATAATTCAACAACTACACAAGCTCAGACTGTCTTTCCGTCTGTGCCTCCTTTATACATACCACCCTTTATGGGCATGCCTATAATATACCCTGGTAACTTGTTTTCTAATGGAAATACTCCTATGCCAGAACCTCCCTCTGGACTACCTGAACCAGCTGATGAGGCTCGTCTTCGTGCCAGTGCCGAAGCCCGTTTCACCGCTTTACGTCAAATA ] [-] EMBL CD164369 [ cnnaACCNTGTCGAATGGATGTCATTCGA GAAGCTAGAGTTCNAAGAAAGACAGCGACAGCAACCTCATCGTTCAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTAATCCAACTGC ACACNCGTCTGTTGCTGCTAATAATC ] [-] EMBL CD064058 [ CC TGTCGAATGGATGTCATTCGA GAAGCTAGAGTTC AAGAAAGACAGCGACAGCAACCTCATCGTTCAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTAATCCAACTGCAACAC CGTCTGTTGCTGCTAATAATCAAAACTTCCCAGTGCCATGGATGCCTCCTGCAAATGCATTTCCGTTTTACCCACCATTTACTCCTCCTACAAATAATTCAACAACTACACAAGCTCAGACTGTCTTTCCGTCTGTGCCTCCTTTATACATACCACCCTTTATGGGCATGCCTATAATATACCCTGGTAACTTGTTTTCTAATGGAAATACTCCTATGCCAGAACCTCCCTCTGGACTACCTGAACCAGCTGATGAGGCTCGTCTTCGTGCCAGTGCCGAAGCCCGTTTCACCGCTTTACGTCAAATAAATGTACTGTGGAATGCTGATGcgtccggtt ] [+] EMBL BG932574 [ CAGCAACCTCATCGTTCAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTAATCCAACTGCAACAC CGTCTGTTGCTGCTAATAATCAAAACTTCCCAGTGCCATGGATGCCTCCTGCAAATGCATTTCCGTTTTACCCACCATTTATTCCTCCTACAAATAATTCAACAACTACACAAGCTCAGACTGTCTTTCCGTCTGTGCCTCCTTTATACGTACCACCCTTTATGGGCATGCCTATAATATACCCTGGTAACTTGTTTTCTAATGGAAATACTCCTATGCCAGAACCTCCCTCTGGACTACCTGAACCAGCTGATGAGGCTCGTCTTCGTGCCAGTGCCGAAGCCCGTTTCACCGCTTTACGTCAAATAAATGTACTGTTGAATGCAGCTGTCCTGCAAATGAATGCTTACCTAAATGCGGCTAGCTCTCCCCCAAGTGAATCAGAACCTATGACTTC] [+] EMBL CD117304 [ CAGTAAACACTAATAATGCACAACCAGATAGCTCAACAACTTCTGGTCCATCTGATCCAACTGCAACAC CGTCTGTTGCTGCTAATAATCAAAACTTCCCAGTGCCATGGATGCCTCCTGCAAATGCATTTCCGTTTTACCCACCATTTATTCCTCCTACAAATAATTCAACAACTACACAAGCTCAGACTGTCTTTCCGTCTGTGCCTCCTTTATACATACCACCCTTTATGGGCATGCCTATAATATACCCTGGTAACTTGTTTTCTAATGGAAATACTCCTATGCCAGAACCTCCCTCTGGACCACCTGAACCAGCTGATGAGGCTCGTCTTCGTGCCAGTGCCGAAGCCCGTTTCACCGCTTTACGTCAAATAAATGTACTGTTGAATGCGGCTGTCCTGCAAATGAATGCTTACCTAAATGCGGCTAGCTCTCCCCCAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||