These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7714#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 650 fasta sequence [TTGAAGCTGACTATATAGATATCGGTAGGGTAGGAAAAAAAGAGGGACAGGACCGTATAAATAAATCTGAAATAATTGGCGCAATGACATTCCTTCGAAAGGCAGGCTAGTGGTAAAGAAGCAGTCAGCAAAAAATGTGATCTCAAAATAACCATGAC-AGACGAAATATATTGACGGAGCAATAAATGTCTGTTAGCCCTGATCAAATGTTGTGTCTGTAAGACTACCAGTCTAGTAAAAGATAAACAATAATATGTATGTGAGGTGGTTAGAATGGCAAAATAAAACCAGTCTAGGATATATGTCTTTAGAACAAAGGTCATTTGGGGAAGAAAATGTTCGTGCAACCTTCTAAATAATAAATTTTAAAATTTAGACGATATTAATTATCTAAACAACAAGAGTAAATTAATGGTAAGCCCTGGTGTAAAATAAGACGACAGTGAAGGTATAGTATGTTTACCTGTGTGTACATGCGAAGCGAATAAATCAGATGGCAATGAAAATTTACTGATTGAAATATTGATATATGCTAAGCAAAGAAAACCTGAAAATTATCTTGGAAATTAAGATGACAATTTGTCGACTGAATTTTAAACTTCGTACACTCATTCACCAGGTATTTGGGTGTGAGTTACACTATATAAAAA] [+] EMBL CD085049 [TTGAAGCTGACTATATAGATATCGGTAGGGTAGGAAAAAAAGAGGGACAGGACCGTATAAATAAATCTGAAATAATTGGCGCAATGACATTCCTTCGAAAGGCAGGCTAGTGGTAAAGAAGCAGTCAGCAAAAAATGTGATCTCAAAATAACCATGAC AGACGAAATATATTGACGGAGCAATAAATGTCTGTTAGCCCTGATCAAATGTTGTGTCTGTAAGACTACCAGTCTAGTAAAAGATAAACAATAATATGTATGTGAGGTGGTTAGAATGGCAAAATAAAACCAGTCTAGGATATATGTCTTTAGAACAAAGGTCATTTGGGGAAGAAAATGTTCGTGCAACCTTCTAAATAATAAATTTTAAAATTTAGACGATATTAATTATCTAAACAACAAGAGTAAATTAATGGTAAGCCCTGGTGTAAAATAAGACGACAGTGAAGGTATAGTATGTTTACCTGTGTGTACATGCGAAGCGAATAAATCAGATGGCAATGAAAATTTACTGATTGAAATATTGATATATGCTAAGCAAAGAAAACCTGAAAATTATCTTG ] [+] EMBL CD085048 [ AAAATGAAGGACAGGACCGTATAAATAAATCTGAAATAATTGGCGCAATGACATTCCTTCGAAAGGCAGGCTACTGGTAAAGAAGCAGTCAGCAAAAAATGTGATCTCAAAATAACCATGACGAGACGAAATATATTGACGGAGCAATAAATGTCTGTTAGCCCTGATCAA ] [+] EMBL CD088229 [ TCAGCAAAAAATGTGATCTCAAAATAACCATGAC AGACGAAATATATTGATGGAGCAATAAATGTCTGTTAGCCCTGATCAAATGTTGTGTCTGTAAGACTACCAGTCTAGTAAAAGATAAACAATAATATGTATGTGAGGTGGTTAGAATGGCAAAATAAAACCAGTCTAGGATATATGTCCTTAGAACAAAGGTCATTTGGGGAAGAAAATGTTCGTGCAACCTTCTAAATAATAAATTTTAAAATTTAGACGATATTAATTATCTAAACAACAAGAGTAAATTAATGGTAAGCCCTGGTGTAAAATAAGACGACAGTGAAGGTATAGTATGTTTACCTGTGTGTACATGCGAAGCGAATAAATCAGATGGCAATGAAAATTTACTGATTGAAATATTGATATATGCTAAGCAAAGAAAACCTGAAAATTATCTTGGAAATTAAGATGACAATTTGTCGACTGAATTTTAAACTTCGTACACTCATTCACCAGGTATTTGGGTGTGAGTTACACTATATAAAAA] [+] EMBL CD071837 [ TCAGCAACAAATGTGATCTCAAAATAACCATGAC AGACGAAATATATTGATGGAGCAATAAATGTCTGTTAGCCCTGATCAAATGTTGTGTCTGAAACCCTACCAGT ] [+] EMBL CD071834 [ GTAAAATAAGACGACAGTGAAGGTATAGTATGTTTACCTGTGTGTACATGCGAAGCGAATAAATCAGATGGCAATGAAAATTTACTGATTGAAATATTGATATATGCTAAGCAAAGAAAACCTGAAAATTATCTTGGAAATTAAGATGACAATTTGTCGACTGAATTTTAAACTTCGTACACTCATACACCAGGTATTTGGGTGTGAGTTACACTATATAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||