Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7751 cluster # 7751       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7751#0 length = 765 sequences # 5  

consensusID : consensus_7751#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 765
fasta sequence
                              [AAGCAAGGGCAGTAACGGCTTCATCTTTTGTTCCCCATTCTACAAGGCCCGAAGAGGACCTATCACTAANCCTTGGGAAAGGTGCAATTTGGCGA-GGTGGTGAAGCACCACANTCNACAATCNACTTGCGCAGTTCCTCTGGGGTATAATTCGGAGGACAATTCCAATAATGCAGAGTATGTGATGGCGGGTAAATCCTATTTTTACTCGCCTTGTCTGGATTTATATATCTATTTTCACGACACCCTGAATAATCTTTGAAAGATGGGGTACCATCTGGTAATTCAAAAGGTTTCGGTACGTCCAGGATAAGTTGTTGTTTACTTGGACGAATCGACAATGCATTGCCCATCAATGGGACTTCTGACAGGTTAGTAATGACACGATCAACACTAACGTTATCGCCCATTTGCGCCATAGCTGATCCTTCTTTAGTCCTCAGAAACTTGATACGAACAACATTACCATAGAGACAAAGAAGGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAGCAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGTGGTAATTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACACTAAGCCCGACAGCATTCTGCTTAATGAAGCCATCATGATAACCGAAGCTGCCACCATTAACAGACCTTGAGCTTTCGTGCCGAGCACGTGAACGTTCAAATCGTCCTAATAGAGAGATAT]

[-] EMBL SMT14508             [AAGCAAGGGCAGTAACGGCTTCATCTTTTGTTCCCCATTCTACAAGGCCCGAAGAGGACCTATCACTAANCCTTGGGAAAGGTGCAATTTGGCGAGGGTGGTGAAGCACCACANTCNACAATCNACTTGCGCAGTTCCTCTGGGGTATAANTCGGAGGANAATTCCAATAATGCAGAGTATGTGATGGCGGGTAAATCCTATTTTTACTCGCCTTGTCTGGANTTATATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD120826             [                                 CCCATTCTACAAGGCCCGAAGAGGACCTATCACTAATCCTTGGGAAAGGTGCAATTTGGCGA GGTGGTGAAGCACCACATTCAACAATCAACTTGCGCAGTTCCTCTGGGGTATAATTCGGAGGACAATTCCAATAATGCAGAGTATGTGATGGCGGGTAAATCCTATTTTTACTCGCCTTGTCTGGATTTATATATCTATTTTCACGACACCCTGAATAATCTTTGAAAGATGGGGTACCATCTGGTAATTCAAAAGGTTTCGGTACGTCCAGGATAAGTTGTTGTTTACTTGGACGAATCGACAATGCATTGCCCATCAATGGGACTTCTGACAGGTTAGTAATGACACGATCAACACTAACGTTATCGCCCATTTGCGCCATAGCTGATCCTTCTTTAGTCCTCAGAAACTTGATACGAACAACATTACCATAGAGACAAAGAAGGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAGCAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGTGGTAANTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACACTAA CCCGACAGCATTCTGCTT                                                                                                  ]
[-] EMBL CD137905             [                                                                                                                                                  ATAATTCGGAGGGCAATTCCAATAATGCAGAGTATGTGATGGCGGGTAGATCCTATTTTTACTCGCCTTGTCTGGATTTATATATCTATTTTCACGACACCCTGAATAATCTTTGAAAGATGGGGTACCATCTGGTAATTCAAAAGGTTTCGGTACGTCCAGGATAAGTTGTTGTTTACTTGGACGAATCGACAATGCATTGCCCATCAATGGGACTTCTGACAGGTTAGTAATGACACGATCAACACTAACGTTATCGCCCATTTGCGCCATAGCTGATCCTTCTTTAGTCCTCAGAAACTTGATACGAACAACATTACCATAGAGACAAAGAAGGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAGCAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGTGGTAATTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACACTAAGCCCGACAGCATTCTGCTTAAT                                                                                               ]
[-] EMBL CD132105             [                                                                                                                                                                                                                                                                                                                                                                                         AATGACACGATCAACACTAACGTTATCGCCCATTTGCGCCATAGCTGATCCTTCTTTAGTCCTCAGAAACTTGATACGAACAACATTACCATAGAGACAAAGAAGGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAGCAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGTGGTAATTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACACTAAGCCCGACAGCATTCTGCTTAATGAAGCCATCATGATAACCGAAGCTGCCACCATTAACAGACCTTGAGCTTTCGTGCCGAGCACGTGAACGTTCAAATCGT                ]
[-] EMBL CD194014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCATAGAGACAAAGAAGGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAGCAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGTGGTAATTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACTCTAAGCCCGACAGCATTCTGCTTAATGAAGCCATCATGATAACCGAAGCTGCCACCATTAACAGACCTTGAGCTTTCGTGCCGAGCACGTGAACGTTCAAATCGTCCTAATAGAGAGATAT]


>consensus_7751#0 AAGCAAGGGCAGTAACGGCTTCATCTTTTGTTCCCCATTCTACAAGGCCCGAAGAGGACC TATCACTAANCCTTGGGAAAGGTGCAATTTGGCGAGGTGGTGAAGCACCACANTCNACAA TCNACTTGCGCAGTTCCTCTGGGGTATAATTCGGAGGACAATTCCAATAATGCAGAGTAT GTGATGGCGGGTAAATCCTATTTTTACTCGCCTTGTCTGGATTTATATATCTATTTTCAC GACACCCTGAATAATCTTTGAAAGATGGGGTACCATCTGGTAATTCAAAAGGTTTCGGTA CGTCCAGGATAAGTTGTTGTTTACTTGGACGAATCGACAATGCATTGCCCATCAATGGGA CTTCTGACAGGTTAGTAATGACACGATCAACACTAACGTTATCGCCCATTTGCGCCATAG CTGATCCTTCTTTAGTCCTCAGAAACTTGATACGAACAACATTACCATAGAGACAAAGAA GGTTGAACAAGCGGTCGCAGTTCATATGATCCATATCCATGTTATATACCATTATGACAG CAGTTGAAGCCCTAGCATAAGGTTGACCATTCAATCCATCGAGACCACGCCTTGATACGT GGTAATTTAAAGCTAACTGGTCCAAGAACGAAGCCGGTGGGACACTAAGCCCGACAGCAT TCTGCTTAATGAAGCCATCATGATAACCGAAGCTGCCACCATTAACAGACCTTGAGCTTT CGTGCCGAGCACGTGAACGTTCAAATCGTCCTAATAGAGAGATAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)