Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7756 cluster # 7756       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7756#0 length = 939 sequences # 5  

consensusID : consensus_7756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 939
fasta sequence
                              [ATCAAAGCAGGCATTAGTAATCTCAGCAACACTAAACTGTTCATGAAATGCTTTTTCAGCTGAAATCACAGGTGAATATGTTGCCAATGGGAAGTGGATACGTGGATAAGGGACCAAATTCGTTTGAAACTCAGTGAGATCAACATTCAAAGCTCCATCAAAACGCAGAGAAGCTGTAATAGAACTCACTATTTGACCAATTAAACGATTTAAGTTCGTGTAAGTTGGACGTTCAATATCTAAATTACGACGACATATGTCGTATATTGCTTCATTATCAACCATAAATGCACAATCCGAATGTTCCAAAGTTGTATGCGTTGTTAAGATAGAATTGTAAGGTTCAACAACAGCAGTTGCAATTTGTGGAGCAGGGTAAACAGAAAACTCAAGCTTCGATTTCTTTCCATACTCAACACTCAGTCGTTCCATCAACAAAGATGTGAAACCTGAACCAGTGCCTCCACCAAATGAATGAAATATCAGAAACCCCTGAAGACCGGTACACTGATCGGCAAGTTTACGAATCCTATCTCACACCAAATCAACAATCTCTTTCCCAATTGTGTAGTGACCACGTGCCTAATTGTTTGCAGCATCTTCTTTACCAGTAATCAATTGCTCAGGATGAAAAAGTTGACGATAAGTACCAGTCCGAACCTCATCTACTACAGTGGGTTCTAAATCTACAAATACTGCTCTTGGAACATGTTTTCCCGAACCAGTTTCACTAAAAAAAGTATTAAAGGAATCGTCTCCACCCCCAACAGTCTTATCACTCGGCATTCGCCCATCAGCTTGAATTCCATGTTCCAAACAATACAATTCCCAACAAGCATTGCCCATTTGAACTCCAGCTTGACCAACATGTACACTAATACATTCCCTCATTCTGAAGCAAGTTGTATTACAGAGCAGATAGCAACAAAAGAAAGTCGT]

[+] EMBL BG931480             [ATCAAAGCAGGCATTAGTAATCTCAGCAACACTAAACTGTTCATGAAATGCTTTTTCAGCTGAAATCACAGGTGAATATGTTGCCAATGGGAAGTGGATACGTGGATAAGGGACCAAATTCGTTTGAAACTCAGTGAGATCAACATTCAAAGCTCCATCAAAACGCAGAGAAGCTGTAATAGAACTCACTATTTGACCAATTAAACGATTTAAGTTCGTGTAAGTTGGACGTTCAATATCTAAATTACGACGACATATGTCGTATATTGCTTCATTATCAACCATAAATGCACAATCCGAATGTTCCAAAGTTGTATGCGTTGTTAAGATAGAATTGTAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD063003             [                                                                                                                                                                                                                                                                                                      cTCCGAATGTTCCAAAGTTGTATGCGTTGTTAAGATAGAATTGTAAGGTTCAACAACAGCAGTTGCAATTTGTGGAGCAGGGTAAACAGAAAACTCAAGCTTCGATTTCTTTCCATACTCAACACTCAGTCGTTCCATCAACAAAGATGTGAAACCTGAACCAGTGCCTCCACCAAATGAATGAAATATCAGAAACCCCTGAAGACCGGTACACTGATCGGCAAGTTTACGAATCCTATCTCACACCAAATCAACAATCTCTTTCCCAATTGTGTAGTGACCACGTGCCTAATTGTTTGCAGCATCTTCTTTACCAGTAATCAATTGCTCAGGATGAAAAAGTTGACGATAAGTACCAGTCCGAACCTCATCTACTACAGTGGGTTCTAAATCTACAAATACTGCTCTTGGAACATGTTTTCCCGAACCAGTTTCACTAAAAAAAGTATTAAAGGAATCGTCTCCACCCCCAACAGTCTTATCACTCGGCATTCGCCCATCAGCTTGAATT                                                                                                                                      ]
[-] EMBL CD077892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTGACCACGTGCATAATTGTTTGCAGCATCATCTTACCCAGTAATCAATTGCTCAGGATGAAAAAGTTGACGATAAGTACCAGTCCGAACCTCATCTACTACAGTGGGTTCTAAATCTACAAATACTGCTCTTGGAACATGTTTTCCCGAACCAGTTTCACTAAAAAAAGTATTAAAGGAATCGTCTCCACCCCCAACAGTCTTATCACTCGGCATTCGCCCATCAGCTTGAATTCC                                                                                                                                    ]
[-] EMBL CD059912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTGACGATAAGTACCAGTCCGAACCTCATCTACTACAGTGGGTTTTAAATCTACAAATACTGCTCTTGGAACATGTTTTCCCGAACCAGTTTCACTAAAAAAAGTATTAAAGGAATCGTCTCCACCCCCAACAGTCTTATCACTCGGCATTCGCCCATCAGCTTGAATTCCATGTTCCAAACAATACAATTCCCAACAAGCATTGCCCATTT                                                                                           ]
[-] EMBL CD194381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGTCTTATCACTCGGCATTCGCCCATCAGCTTGAATTCCATGTTCCAAACAATACAATTCCCATCAAGCATTGCCCATTTGAACTCCAGCTTGACCAACATGTACACTAATACATTCCCTCATTCTGAAGCAAGTTGTATTACAGAGCAGATAGCAACAAAAGAAAGTCGT]


>consensus_7756#0 ATCAAAGCAGGCATTAGTAATCTCAGCAACACTAAACTGTTCATGAAATGCTTTTTCAGC TGAAATCACAGGTGAATATGTTGCCAATGGGAAGTGGATACGTGGATAAGGGACCAAATT CGTTTGAAACTCAGTGAGATCAACATTCAAAGCTCCATCAAAACGCAGAGAAGCTGTAAT AGAACTCACTATTTGACCAATTAAACGATTTAAGTTCGTGTAAGTTGGACGTTCAATATC TAAATTACGACGACATATGTCGTATATTGCTTCATTATCAACCATAAATGCACAATCCGA ATGTTCCAAAGTTGTATGCGTTGTTAAGATAGAATTGTAAGGTTCAACAACAGCAGTTGC AATTTGTGGAGCAGGGTAAACAGAAAACTCAAGCTTCGATTTCTTTCCATACTCAACACT CAGTCGTTCCATCAACAAAGATGTGAAACCTGAACCAGTGCCTCCACCAAATGAATGAAA TATCAGAAACCCCTGAAGACCGGTACACTGATCGGCAAGTTTACGAATCCTATCTCACAC CAAATCAACAATCTCTTTCCCAATTGTGTAGTGACCACGTGCCTAATTGTTTGCAGCATC TTCTTTACCAGTAATCAATTGCTCAGGATGAAAAAGTTGACGATAAGTACCAGTCCGAAC CTCATCTACTACAGTGGGTTCTAAATCTACAAATACTGCTCTTGGAACATGTTTTCCCGA ACCAGTTTCACTAAAAAAAGTATTAAAGGAATCGTCTCCACCCCCAACAGTCTTATCACT CGGCATTCGCCCATCAGCTTGAATTCCATGTTCCAAACAATACAATTCCCAACAAGCATT GCCCATTTGAACTCCAGCTTGACCAACATGTACACTAATACATTCCCTCATTCTGAAGCA AGTTGTATTACAGAGCAGATAGCAACAAAAGAAAGTCGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)