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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7784 cluster # 7784       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7784#0 length = 764 sequences # 5  

consensusID : consensus_7784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 764
fasta sequence
                              [ATGATGCCAGATCTCTTTA-GAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT-AAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGGCAACTGTTCAGGCAAACCGATCGGGCCATATCCCCACCACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTCTGGTAGCTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCCTGGGCAACATGAAAATACGGTAAAGACAAAAACAGA-TGACCCAGTTGTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCCTGGATTAAGCGAATATTCAACTTCAGATTCTGACCAGTCAACAGATTCGGATGATGACGAATCAACTGATGTTGAAGATGCTGTTTGTACATTACAGCAAATAGCCTGTACAAGAATACGATATGCTAAAGCTGATGGTGCCGTGGATAATGACTAAAATTTGTCCAAGCAATGTTTTCTGATGTACAGTATAACGCGAAATTTGTGACTAAATTGTATATTTCTCTCTTTAAATTTCCTTCATTGTTTCAGTCGTAATAACC]

[-] EMBL CD095592             [ATGATGCCAGATCTCTTTATGAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCTAAAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD192622             [   ATGCCAGATCTCTTTATGAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT AAAAAATCGAATCCATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD083500             [                  g aggAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTATGAAGCCACTAATGCTCT AAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATACCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGCTGAGTTAGTTAGAGAGGCAACTGTTCAGGCAAACCGATCGGGCCATATCCCCACCACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTCTGGTAGCTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCCTGGGCAACATGAAAATACGGTAAAGACAAAAACAGA TGACCCAGTTGTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCC                                                                                                                                                                                                                                                                       ]
[-] EMBL CD170034             [                                                                                                                                                                                                                                             ACAAGCGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGCTCTTCTTGCTAATGCTGTTAAACGCAATTC      CTTGGATATGTCAGGTCCACAATCGAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCC GGGCAACATGAAAAT CGGTAAAGACAAAAACAGANTGACCC                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL SMW780               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTCTCTAAATTGCTTAATGGTTCTGTCATGCGACCTGTCGCTGTGCTGCCTGGATTAAGCGAATATTCAACTTCAGATTCTGACCAGTCAACAGATTCGGATGATGACGAATCAACTGATGTTGAAGATGCTGTTTGTACATTACAGCAAATAGCCTGTACAAGAATACGATATGCTAAAGCTGATGGTGCCGTGGATAATGACTAAAATTTGTCCAAGCAATGTTTTCTGATGTACAGTATAACGCGAAATTTGTGACTAAATTGTATATTTCTCTCTTTAAATTTCCTTCATTGTTTCAGTCGTAATAACC]


>consensus_7784#0 ATGATGCCAGATCTCTTTAGAAAGATTGCAGGCTGAGAAAGATAGAAAACAGGAAGAGTA TGAAGCCACTAATGCTCTAAAAAATCGAATCCATCGTTTGGATGAAGATGAAGTTGAATA CCTCCAGACACTTGCTACCAAACAGTACAAAGCTGATATGGAGAAAGAGAAAGAAGTAGC TGAGTTAGTTAGAGAGGCAACTGTTCAGGCAAACCGATCGGGCCATATCCCCACCACAAG CGTCACAATCGACCCCACTTCAAAACCATTTTATAATAAAGGAGGGTCAAGCCAACGTGC TCTTCTTGCTAATGCTGTTAAACGCAATTCTGGTAGCTTGGATATGTCAGGTCCACAATC GAAGCGGTCAAATATAAGAACACCCTCTTCTAGTGAAATGTGTCCTGGGCAACATGAAAA TACGGTAAAGACAAAAACAGATGACCCAGTTGTCTCTAAATTGCTTAATGGTTCTGTCAT GCGACCTGTCGCTGTGCTGCCTGGATTAAGCGAATATTCAACTTCAGATTCTGACCAGTC AACAGATTCGGATGATGACGAATCAACTGATGTTGAAGATGCTGTTTGTACATTACAGCA AATAGCCTGTACAAGAATACGATATGCTAAAGCTGATGGTGCCGTGGATAATGACTAAAA TTTGTCCAAGCAATGTTTTCTGATGTACAGTATAACGCGAAATTTGTGACTAAATTGTAT ATTTCTCTCTTTAAATTTCCTTCATTGTTTCAGTCGTAATAACC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)