Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7814 cluster # 7814       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7814#0 length = 783 sequences # 5  
consensusID : consensus_7814#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 783
fasta sequence 
                              [AAAATTAGAAACCAGTCAATTAGGTTATGAATCTTCAACAACTGAAGCTGTTGAGACACATATTACGTATGTTTGACCGCCATTCGCCTTGATAGGTGATGTTTATTGATGTAGGAGGAGTCTAGAGGGAAGCTGGGAAGTTTGTGGGCACCGTGTGACAATTGCTTCTGATTCGAGTGGCTGTGACTGATTTTGAGAACGAGCAGGTAGATATATAGGAGACTGGACCTGTGATGGTGTATGAGAAGAGCAGCGAGGAGATTTGGAGTCTCTTCGTTGAATTGGTCGCCCAACTTCATCATGAAGACGTTTCAGTTTGAGCAGTTGACTTGCACTAAGTGACGTAGCTGGTGTTTGGGAATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGATTTGCGGCAGTGAAAGTATAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATTAGCATCAGTTGGATTTGCTTTTGAGACATTCTGTTCACCGTAATTTTCACTGGTAACACGTTCGACAGTTACAGACCCTGACAAGTGATCTCTAGGTAAATCTCCGTGATTAGTAGTCTCAACTGATGCACTTGCTTCCGGTTGATTGAACGTGCGGGATTGATGAACGATTCCCCGGACGCCAGGCGGCCG]

[+] EMBL CD146836             [AAAATTAGAAACCAGTCAATTAGGTTATGAATCTTCAACAACTGAAGCTGTTGAGACACATATTACGTATGTTTGACCGCCATTCGCCTTGATAGGTGATGTTTATTGATGTAGGAGGAGTCTAGAGGGAAGCTGGGAAGTTTGTGGGCACCGTGTGACAATTGCTTCTGATTCGAGTGGCTGTGACTGATTTTGAGAACGAGCAGGTAGATATATAGGAGACTGGACCTGTGATGGTGTATGAGAAGAGCAGCGAGGAGATTTGGAGTCTCTTCGTTGAATTGGTCGCCCAACTTCATCATGAAGACGTTTCAGTTTGAGCAGTTGACTTGCACTAAGTGACGTAGCTGGTGTTTGGGAATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGATTTGCGGCAGTGAAAGTATAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACC                                                                                                                                                                                                                                    ]
[+] EMBL CD124128             [                                                                                                                                                                                                                                        GATGGTGTATGAGAAGAGCAGCGAGGAGATTTGGAGTCTCTTCGTTGAATTGGTCGCCCAACTTCATCATGAAGACGTTTCAGTTTGAGCAGTTGACTTGCACTAAGTGACGTAGCTGGTGTTTGGGAATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGGTTTGCGGCAGTGAAAGTATAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATTAGCATCAGTTGGATTTGCTTTTGAGACATTCTGTTCACCGTAATTTTCACTGGTAACACGTTCGACAGTTACAGACCCTGACAAGTGATCTCTAGGTAAATCTCC                                                                                       ]
[-] EMBL CD124158             [                                                                                                                                                                                                                                         ATGGTGTATGAGAAGAGCAGCGAGGAGATTTGGAGTCTCTTCGTTGAATTGGTCGCCCAACTTCATCATGAAGACGTTTCAGTTTGAGCAGTTGACTTGCACTAAGTGACGTAGCTGGTGTTTGGGAATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGGTTTGCGGCAGTGAAAGTATAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATTAGCATCAGTTGGATTTGCTTTTGAGACATTCTGTTCACCGTAATTTTCACTGGTAACACGTTCGACAGTTACAGACCCTGACAAGTGATCTCTTGGTAAATCTCCG                                                                                      ]
[-] EMBL CD115839             [                                                                                                                                                                                                                                                                                                                                 CAGTTGACTTGCACTAAGTGACGTAGCCTGTGTTTGGGAATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGATTTGCGGCAGTGAAAGTAAAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATTAGCATCAGTTGGATTTGCTTTTGAGACAATCTGTTCACCGTAATTTTCACTGGTAACACGTTCGACAGTTACAGACCCTGACAAGTGATCTCTAGGTAAATCTCCGTGATTAGTAGTCTCAACTGATGCACTTGCTTCCGGTTGATTGAACGTGCGGGATTGATGAACGATTCCCCGGACGCCAGGCGGCCG]
[+] EMBL CD183082             [                                                                                                                                                                                                                                                                                                                                                                             CCATACCTAAAATAGGTTCTTCATCGTTGAAAGGATTTGCGGCAGTGAAAGTATAGGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACCGGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAAGAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATT                                                                                                                                                                                                ]




>consensus_7814#0
AAAATTAGAAACCAGTCAATTAGGTTATGAATCTTCAACAACTGAAGCTGTTGAGACACA
TATTACGTATGTTTGACCGCCATTCGCCTTGATAGGTGATGTTTATTGATGTAGGAGGAG
TCTAGAGGGAAGCTGGGAAGTTTGTGGGCACCGTGTGACAATTGCTTCTGATTCGAGTGG
CTGTGACTGATTTTGAGAACGAGCAGGTAGATATATAGGAGACTGGACCTGTGATGGTGT
ATGAGAAGAGCAGCGAGGAGATTTGGAGTCTCTTCGTTGAATTGGTCGCCCAACTTCATC
ATGAAGACGTTTCAGTTTGAGCAGTTGACTTGCACTAAGTGACGTAGCTGGTGTTTGGGA
ATCATCCATACCTAAAATAGGTTCTTCATCGTTGAAAGGATTTGCGGCAGTGAAAGTATA
GGAACTGGCAGCACTGACTACGTTGTATGGAGCGCTACCTGAAGGGCACGTATCCGTACC
GGATGTGACTACAGGATTCACACTTTTTATATCAGTTTCACTAGAAATCACATCTGACAA
GAAATCTTTTACACCCACTTCAGTTTCCGGCGTTTTAGTAATGGGATCATTAGCATCAGT
TGGATTTGCTTTTGAGACATTCTGTTCACCGTAATTTTCACTGGTAACACGTTCGACAGT
TACAGACCCTGACAAGTGATCTCTAGGTAAATCTCCGTGATTAGTAGTCTCAACTGATGC
ACTTGCTTCCGGTTGATTGAACGTGCGGGATTGATGAACGATTCCCCGGACGCCAGGCGG
CCG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)