These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7821#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 495 fasta sequence [TTGCAAATACTTTCTCCACCAA-TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAAACATCTGCTTA] [+] EMBL CD065677 [TTGCAAATACTTTCT CA CAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGGGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGT ] [+] EMBL CD065576 [ TTTCTCCACCAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCGCACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAAACATCTGCTTA] [+] EMBL CD065584 [ TTTCTCCACCAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAGAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAA ] [-] EMBL CD065625 [ TTCTCCACCGA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCGGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCAGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTAT AGTCCACCAAA ] [+] EMBL CD065646 [ CAACTCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGGGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||