These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1127 fasta sequence [ACAAAAATATCTTTCTTCTACTAATTCCATCATCTTGCCCAGATAAATAAGGCACAAATATCAGTCGCTAAGAAAAAGGGTCGAATAATTCAATACATGTATATGTAAATGTGGAATTGGTTATCGCGGAACTCCTTTAGAGTAATAGGTTTCTCGGTGCTTATACGTGACTACTCGTTGGTGTCCATTACGGTTTATGGTCTTAAATTCACCAAACCGGACCACTAAGATAATCAAACATCTAAATCGATTGTATTTAGTAAGACAAATTCTTTAATAGGAACATACTATACAAACTGTTGTCGAAATGTTAAGTGGGTTAGGTAAATTAGTATTTCGATTTTTTCAGCAAGCCCGGGCGCCAGTACAGTGGATGTGTTTCTTCCGTCGCTGATTCATCTTCTTTGAAGATCTTTATTGATTTGTCTGCTTCACAGGATACCAAGCGAGATCCACTACGATCAAATGCTAAAGCAAATACCCCAGC-TTCAGAATCGATGCTGCCAGGCTGAACTTGAGCTTGAAGACGCTGAAAGTTATACCCAGATTTCCAATCCCAAAAGTGAACACTGCCATTATCGCCTCCACTGACGACCACATTATCTTGGTTAACAGTGATGGCATTAATGATAGCATTATGTCCAGATAGATTCTGAAGAAAGACACCATTGGGGAGTTTCCATTGTTTTATATTATCTGGTGATCCAGAAACAAATGCATTCTGAGTTGGATGGATACATACAGCTCGGACAGATTTCTTGTGATTTGTCAGACAGGCTATGGTACGTCCTGCCGCCAAGTCCCAAAGGCGGACGGTCGCATCATGTGA-CCCAGTAATCACTTGAGGATCAGATTCTTGACAACGTACTGTTGCTACTGTGTTCGAATGT-CCTGTTAGAGTATGAACATTGACTTTGGTTCGCATGTCCCATACTCGTGCAGTTGCATCCCGACCACAAGTAAGGACCACATCGATTGTTGGATGAATATCAATA-TCGT-AA-CAGCAGACATATGACCA--TGATAATGACGAATAACCTTATTCTGCTCCAAATCCCAACAACGAACTGTTTTGTCTTCTCCACATGAAAATAAGTAAGGATGACGAGCACTGACAACAACACCTCTAA] [+] EMBL CD137532 [ACAAAAATATCTTTCTTCTACTAATTCCATCATCTTGCCCAGATAAATAAGGCACAAATATCAGTCGCTAAGAAAAAGGGTCGAATAATTCAATACATGTATATGTAAATGTGGAATTGGTTATCGCGGAACTCCTTTAGAGTAATAGGTTTCTCGGTGCTTATACGTGACTACTCGTTGGTGTCCATTACGGTTTATGGTCTTAAATTCACCAAACCGGACCACTAAGATAATCAAACATCTAAATCGATTGTATTTAGTAAGACAAATTCTTTAATAGGAACATACTATACAAACTGTTGTCGAAATGTTAAGTGGGTTAGGTAAATTAGTATTTCGATTTTTTCAGCAAGCCCGGGCGCCAGTACAGTGGATGTGTTTCTTCCGTCGCTGATTCATCTTCTTTGAAGATCTTTATTGATTTGTCTGCTTCACAGGATACCAAGCGAGATCCACTACGATCAAATGCTAAAGCANATACCCCAGC TTCA ] [+] EMBL CD145394 [ TAAGTGGGTTAGGTAAATTAGTATTTCGATTTTTTCAGCAAGCCCGGGCGCCAGTACAGTGGATGTGTTTCTTCCGTCGCTGATTCATCTTCTTTGAAGATCTTTATTGATTTGTCTGCTTCACAGGATACCAAGCGAGATCCACTACGATCAAATGCTAAAGCAAATACCCCAGC TTCAGAATCGATGCTGCCAGGCTGAACTTGAGCTTGAAGACGCTGAAAGTTATACCCAGATTTCCAATCCCAAAAGTGAACACTGCCATTATCGCCTCCACTGACGACCACATTATCTTGGTTAACAGTGATGGCATTAATGATGGCATTATGTCCAGATAGATTCTGAAGAAAGACACCATTGGGGAGTTTCCATTG TTTATATTATCTGGTGATCCAGAAACAAATGCATTCTGAGTTGGATGGATACATACAGCTCGGACAGATTTCTTGTGATTTGTCAGACAGGCTATGGTACGTCCTGCCGCCAAGTCCCANAGGCGGACGGTCGCATCATGTGACCCCAGT ATCACTTGAGGATCAGATTCTTGACAACGTACTGTTGCTACTGTGTNCGAATGTNCCTG TAGAGTATGAACATTGACTTTGGTTCGCATGTNCCATACTCGTGCAGTTGCATCCCGACCACNAGTANGGACCACATCGATGGGTGGATGAATATCANTATTCGT AA CAGCAGACATATGACCATTTGAT ATGACAGAT ACCTTATTCTGC ] [-] EMBL CD145434 [ gTAAGTGG TAGGTAAA TAGTA TTCGA TTTTTCAGCAAGCCGGGGCGCCAGTACAGTGNATGTG TCCCTCCGTCGCTGATTCATCTTCTTGAAAGATCTTTANTGATTTGTCTGCTTCACAGGATACCAAGCGAGATCCACTACGATCAAATGCTANAGCAAATA CCCAGCTTTCAGAATCGATGCTGCCAGGCTGAACTTGAGCTTGAAGACGCTGANAGTTATACNCAGATTTCCAATCCCAAAAGTGAACACTGCCATTATCGCCTCCACTGACGACCACATTATCTTGGTTAACAGTGATGGCATTAATGATAGCATTATGTCCAGATAGATTCTGAAGAAAGACACCATTGGGGAGTTTCCATTGTTTTATATTATCTGGTGATCCAGAAACAAATGCATTCTGAGTTGGATGGATACATACAGCTCGGACAGATTTCTTGTGATTTGTCAGACAGGCTATGGTACGTCCTGCCGCCAAGTCCCAAAGGCGGACGGTCGCATCATGTGA CCCAGTAATCACTTGAGGATCAGATTCTTGACAACGTACTGTTGCTACTGTGTTCGAATGT CCTGTTAGAGTATGAACATTGACTTTGGTTCGCATGTCCCATACTCGTGCAGTTGCATCCCGACCACAAGTAAGGACCACATCGATTGTTGGATGAATATCAATA TCGTAAA CAGCAGACATATGACCA TGATAATGACGAATAACCTTATTCTGC ] [-] EMBL CD121735 [ AGTGGATGTG TTCTTCCGTCGCTGATTCATCTTCTTTGAAGATCTNTATTGATTTGTCTGCTTCACAGGATACCAAGCGAGATCCACTACGATCAAATGCTAAAGCAAATACCCCAGC TTCAGAATCGATGCTGCCAGGCTGAACTTGAGCTTGAAGACGCTGAAAGTTATACCCAGATTTCCAATCCCAAAAGTGAACACTGCCATTATCGCCTCCACTGACGACCACATTATCTTGGTTAACAGTGATGGCATTAATGATAGCATTATGTCCAGATAGATTCTGAAGAAAGACACCATTGGGGAGTTTCCATTGTTTTATATTATCTGGTGATCCAGAAACAAATGCATTCTGAGTTGGATGGATACATACAGCTCGGACAGATTTCTTGTGATTTGTCAGACAGGCTATGGTACGTCCTGCCGCCAAGTCCCAAAGGCGGACGGTCGCATCATGTGA CCCAGTAATCACTTGAGGATCAGATTCTTGACAACGTACTGTTGCTACTGTGTTCGAATGT CCTGTTAGAGTATGAACATTGACTTTGGTTCGCATGTCCCATACTCGTGCAGTTGCA ] [-] EMBL CD147075 [ CAGTAATCACTTGAGGATCAGATTCTTGACAACGTACTGTTGCTACTGTGTTCGAATGT CCTGTTAGAGTATGAACATTGACTTTGGTTCGCATGCCCCATACTCGTGCAGTTGCATCCCGACCACAAGTAAGGACCACATCGATTGTTGGATGAATATCAATA TCGT AACCAGCAGACATATGACCA TGATAATGACGAATAACCTTATTCTGCTCCAAATCCCAACAACGAACTGTTTTGTCTTCTCCACATGAAAATAAGTAAGGATGACGAGCACTGACAACAACACCTCTAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||