These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1466 fasta sequence [ATTAGACTGACAGGAGTGTACACAATGAATGCAAAACAGTTATCATAGCACAGGGTAAAACGTTATGCCGGGAGATATTGGACGTATACCCATAATAACTCTTAGCGGATGCAAGTATTTGACCAACATAATCAATGACCTCCCTCTTCCTAAATCGACTAATGTCCCCATAAAATGTCATACTCTACTAAATGATCAAAAATTCGCTCAAGAGGCCTACAGATGTATCAATTGTCAGAATGAGGCCCTTGTTGGAGCACTGATTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAGAACAACCCATCTTGTTTGAATAAATCAAAGAAATCAGAAGATTACACTGAAATAGCTGAGAACTCATCGAAACTAATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATGACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAATGAATCAGTGGGGAGTCTTCCTCGTAGTCCTTTGTCTATGCTTTCAATAACTCATACCCAACCACTTCAGGTAAAACATCCCTGTC] [-] EMBL CD190327 [ATTAGACTGACAGGAGTGTACACAATGAATGCAAAACAGTTATCATAGCACAGGGTAAAACGTTATGCCGGGAGATATTGGACGTATACCCATAATAACTCTTAGCGGATGCAAGTATTTGACCAACATAATCAATGACCTCCCTCTTCCTAAATCGACTAATGTCCCCATAAAATGTCATACTCTACTAAATGATCAAAAATTCGCTCAAGAGGCCTACAGATGTATCAATTGTCAGAATGAGGCCCTTGTTGGAGCACTGATTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAA ] [+] EMBL CD185042 [ TTAAAGCCATAAGCAGTGTTAACAATGATGTACAATTCAAGGACAAGTCTCTTGAGCACACTATAGACTGTCCTACTTCTCCTTTGCTACTTCGAGCCCTCCTGGAAAAGAAGCCAGATATTTTATCTGGTAAGGTTTCACAAAACATCTCGCGTGAACTTGAAGGTCTCCCTACAAATGCACTATTGGTCTCTAGAGGGCCGGCCATTAATAGGCTCAGAACAGCTGATAAGCAGAAAAGTAAGAAGCCTAAGGGTGGCAGCATCACTTATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTNAATCTTTA ] [-] EMBL CD179421 [ TATAATGCAGTGAGTGTAGCTCCACTAAAAATCTCGATCAAGAAGACCTGTACTTCGAAAATTAAGAAAACTTCAAGTAGTGGAAAAACTCTAGATGATAATTCCATGAACCATAATATTCAGACGGGAAATTCTCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAG ] [+] EMBL CD183542 [ TCTGGATAAAACTGGAGCATGCCTTGTAAAAATAGCTACTCACACTCTCGATTCTCTAAATCTTTATGATAGTTCAGCAAGCCAAACACTTGATTCTACTACTGAATCCCAGAACAACCCATCTTGTTTGAATAAATCAAAGAAATCAGAAGATTACACTGAAATAGCTGAGAACTCATCGAAACTAATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATGACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCANACTCGGCGAATCCCCGATCCAGCGTTGTCCCANATCTTTCATTCTGTGGCTCTCT ] [+] EMBL CD065218 [ AATCAATTCTACGGGTTTGATCTCTTTATGCTCTACAATAAATCCCATAACAGACCAGACTAGTTGCACACTGTCAAATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAAATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAATGAATCAGTGGGGAGTCTTCCTCGTAGTCCTTTGTCTATGCTTTCAATAACTCATACCCAACCACTTCAGGTAAAACATCCCTGTC] [-] EMBL CD123026 [ AATTCATCAGCGAATGTTTTGATTGAAGATGCATCAAGAATGGAAGACCCGTCGACTTTACATACTTCTCACTCTCCGTGCAAGGCTGATCAATTGTGTACAGAACACTCCCCGTCTCCTAAGATTAATGATCTTACCTTTGAATCGTCGGGTTATGATACGAACTCAGCTCAAACTCGGCGAATCCCCGATCCAGCGTTGTCCCAAATCTTTCATTCTGTGGCTCTCTTTCACACTTACCAGCCTACATGCGAGCCCGACAAAGGAGTGGATAACGAAGGTGGTGGCCTTTTTGACGACTGGGTCGATGCACCAAAACTTTCGGAATCACCAGTTGTGTCTGTTCCTACAGTACCAAATAAATCTAACCCCACTGGATGTACTTCTCAGACGCCTTGCATTTCATCTACATCAGCAGCCGTCAAGGAGAAGTTATGTATCTGTGCTGATAAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||