Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8041 cluster # 8041       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8041#0 length = 695 sequences # 6  

consensusID : consensus_8041#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 695
fasta sequence
                              [TTCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTT-GAATGTGTATCGAACCGGTTCATCACAGGCTCCATCGCGACGCCAATGTCACGTTTGAGAGTATTTGAATTATAGTATAAACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAATGTACTGTATTATGAATTGAAAGTGAAAACAGTCTTCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATGTAGAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTCAGGCTTGTAAGCAATTTCATCAGAAATATGTGACTCATTATGACAAACCGCATGTGGTACAATAACACGAGAAATGTGATAAGAAGTTGGTTGATCGGAAACTTTTGTCTCACAGTGATTCTAGGTTTGATTCAACTCTGAACTGCTATGCTTCATTTCCGATGAGAGTGAGCAAATGAGCCACAATATTGAAATACTCAGTATGTTGCTTGGTCATAGTCCAGATTTCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTTGAATGTGTATCGAACCGGT]

[+] EMBL CD089097             [TTCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTT GAATGTGTATCGAACCGGTTCATCACAGGCTCCATCGCGACGCCAATGTCACGTTTGAGAGTATTTGAATTATAGTATAAACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAATGTACTGTATTATGAATTGAAAGTGAAAACAGTCTTCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCATAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATGTAGAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTC                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD089108             [TTCCAACCTCTCCATGTCATCATCGAAGGCATTTACTTTTGGAGTGTGTATCGAACCGGTTCATCACAGGCTCCATCGCGACGCCAACGT ACGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD089028             [ TCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTT GAATGTGTATCGAACCGGTTCATCACAGGCTTCATCGCGACGCCAATGTGACGTTTGAGAGTATTTGAATTATAGTATAAACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAATGTACTGTATTATGAATTGAAAGTGAAAACAGTCATCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATGTATAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTCAGGCTTGTAAGCAATTTCATCAGAAATATGTGACTCATTATGACAAACCGCATGTGGTACAATAACACGAGAAATGTGATAAGAA                                                                                                                                                                                                        ]
[-] EMBL CD089093             [ TCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTT GAATGTGTATCGAACCGGTTCATCACAGGCTCCATCGCGACGCCAATGTCACGTTTGAGAGTATTTGAATTATAGTATAAACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAATGTACTGTATTATGAATTGAAAGTGAAAACAGTCTTCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATGTAGAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTCAG                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD089144             [  CCAACCTCTCCATGTCATCATCGAAAGCATTTACATTT GAATGTGTATCGAACCGGTTCATCACAGGCTCCATCGCGACGCCAATGTCACGTTTGAGAGTATTTGAATTATAGTATAAACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAATGTACTGTATTATGAATTGAAAGTGAAAACAGTCTTCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATGTAGAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTCA                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD086040             [                                                                                                                                ATACCAGCAATAACGCAATTTCATCGATCAGTATTCGATGAGCACGAACGAATGTACTATATTATGAATTGAAAGTGAAAACAGTCATCAATACAAAGAAATCATTGATTCGTGTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACGTCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATTATCTACAATGGTTTTCGATCGTGATTTGACTCACTCAGCAATTTATGTTCAGGCTTGTAAGCCATTTCATCAGAAATATGTGACACATTATGACAAACCACATCTGGTACAATAACACGAGAAATGTGATAAGAAGTTGGTTGATCGGAAACTTTTGTCTCACAGTGATTCTAGGTTTGATTCAACTCTGAACTGCTATGCTTCATTTCCGATGAGAGTGAGCAAATGAGCCACAATATTGAAATACTCAGTATGTTGCTTGGTCATAGTCCAGATTTCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTTGAATGTGTATCGAACCGGT]


>consensus_8041#0 TTCCAACCTCTCCATGTCATCATCGAAAGCATTTACATTTGAATGTGTATCGAACCGGTT CATCACAGGCTCCATCGCGACGCCAATGTCACGTTTGAGAGTATTTGAATTATAGTATAA ACTAGCAATTCCAGCAATAACGCAATTTCATCAATCAGTATTCGATGAGCACGAACGAAT GTACTGTATTATGAATTGAAAGTGAAAACAGTCTTCAATACAAAGAAATCATTGATTCGT GTGAACAGCTGATCCGACACAGCCTTAATTGCAGTGTCAGTGTCTGTGATCGATTGAACG TCTTCCTCTTGAGTTCATCTTACGTCTGTTCGACAGTGTATTGGATGTAGACTGTGTATT ATGTAGAATGGTTTTTGATCATGATTTGACTCATTCAGCAATTTATGTTCAGGCTTGTAA GCAATTTCATCAGAAATATGTGACTCATTATGACAAACCGCATGTGGTACAATAACACGA GAAATGTGATAAGAAGTTGGTTGATCGGAAACTTTTGTCTCACAGTGATTCTAGGTTTGA TTCAACTCTGAACTGCTATGCTTCATTTCCGATGAGAGTGAGCAAATGAGCCACAATATT GAAATACTCAGTATGTTGCTTGGTCATAGTCCAGATTTCCAACCTCTCCATGTCATCATC GAAAGCATTTACATTTGAATGTGTATCGAACCGGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)