These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8099#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 955 fasta sequence [AACTTATATACCTTACCGTCGCTTTTGGCCTTGAAACTGCCAATTCTTTCAATCTCGATTAAACAGCGTTTATTTATGAAAAAAAACAGTTCAGAGTATTCAGTTACCACAAATTCTATGGATAAATCGAGGACTTAAGAGTACTCTGGCTCAACCAATCTAAAATGATTTTGTTGCAAAAAATACGTGCTCGCTTGTTAATTCCAACCCCCAAAGTACTTTCCAGACTTATTAATCACTTTTCTGGTCATTACTGTACTGAGTCAAAGTCACCAGTTGGACAAGAACCTATTAATAATAATGTGGAAGAAGATACAGTTTTTGAAGTCTATGATGAACATTGGGAAGTAAACCCAGTTGTTGAGCAGGTTCATATACACCCTAAGATGAGACCCGAAGAAAATCTATCTTTTATACGCGTGAAAAATCTTTTTGATATACCAGAATTAATGAAAGCATTAGAACGTGAAAATATCCGAGATATTGTTTGCCTGAATGTGAATTGTAACTTCCTAGCTCCTTATATGGTTATTGGAAGTGGTTTATCTAAAAGACACATTCAAAACACTGCTGTCCATATACACAAACTGCTGAAATACAAATTGAGGGATACAAGTATTCCACTGCCACTGTTCCAGGGAATCGATGGGTCCTGCGAATGGATAGCTGTCGATATGAATACCATTTTCCTTCATCTATTTTTACCTGCTAC-AAGATTAAAGTACGATTTAGAATCGCTCTGGGGCGCTGGTCCACAATATGATGACCAACTTTTTCAGAAAAACACAGCAGAATTATCGAATAGAAACTTTAATTGGGAACAATTATTATCCGAAATTCAACAGGCCAAGCAATCTTTTTAATAAGTATCAACATGTTGACTGAAATTGAGAGAAAAACTNTACGAATATATGTATATCCCTATTCGATCATATTTCAAAGTAGACACAGGCTT] [-] EMBL CD190077 [AACTTATATACCTTACCGTCGCTTTTGGCCTTGAAACTGCCAATTCTTTCAATCTCGATTAAACAGCGTTTATTTATGAAAAAAAACAGTTCAGAGTATTCAGTTACCACAAATTCTATGGATAAATCGAGGACTTAAGAGTACTCTGGCTCAACCAATCTAAAATGATTTTGTTGCAAAAAATACGTGCTCGCTTGTTAATTCCAACCCCCAAAGTACTTTCCAGACTTATTAATCACTTTTCTGGTCATTACTGTACTGAG ] [-] EMBL CD190205 [AACTTATATACCTTACCGTCGCTTTTGGCCTTGAAACTGCCAATTCTTTCAATCTCGATTAAACAGCGTTTATTTATGAAAAAAAACAGTTCAGAGTATTCAGTTACCACAAATTCTATGGATAAATCGAGGACTTAAGAGTACTCTGGCTCAACCAATCTAAAATGATTTTGTTGCAAAAAATACGTGCTCGCTTGTTAATTCCAACCCCCAAAGTACTTTCCAGACTTATTAATCACTTTTCTGGTCATTACTGTACTGAG ] [+] EMBL CD186191 [ TGATTTTGTTGCAAAAAATACGTGCTCGCTTGTTAATTCCAACCCCCAAAGTACTTTCCAGACTTATTAATCACTTTTCTGGTCATTACTGTACTGAGTCAAAGTCACCAGTTGGACAAGAACCTATTAATAATAATGTGGAAGAAGATACAGTTTTTGAAGTCTATGATGAACATTGGGAAGTAAACCCAGTTGTTGAGCAGGTTCATATACACCCTAAGATGAGACCCGAAGAAAATCTATCTTTTATACGCGTGAAAAATCTTTTTGATATACCAGAATTAATGAAAGCATTAGAAC ] [+] EMBL AI977232 [ ATACACCCTAAAATGAGACCCGAAGAAAATCTATCTTTTATACGCGTGAAAAATCTTTTTGATATACCAGAATTAATGAAAGCATTAGAACGTGAAAATATCCGAGATATTGTTTGCCTGAATGTGAATTGTAACTTCCTAGCTCCTTATATGGTTATTGGAAGTGGTTTATCTAAAAGACACATTCAAAACACTGCTGTCCATATACACAAACTGCTGAAATACAAATTGAGGGATACAAGTATTCCACTGCCACTGTTCCAGGGAATCGATGGGTCCTGCGAATGGATAGCTGTCGATATGAATACCATTTTCCTTCATCTATTTTTACCTGCTAC AAGATTAAAGTACGATTTAGAATCGCTCTGGGGCGCTGGTCCACAATATGATGACCAACTTTTTCAGAAAAACACAGCAGAATTATCGAATAGAAACTTTAATTGGGAACAATTATTATCCGAAATTCAACAGGCCAAGCAATCTTTTTAATAAGTATCAACATGTTGACTGAAATTGAGAGAAAAACTNTACGAATATATGTATATCCCTATTCGATCATATTTCAAAGTAGACACAGGCTT] [-] EMBL CD164977 [ TATCTNTTATACGCGTGAAAAATCTTTTTGATATACCAGAATTAATGAAAGCATTAGAACGTGAAAATATCCGAGATATTGTTTGCCTGAATGTGAATTGTAACTTCCTAGCTCCTTATATGGTTATTGGAAGTGGTTTATCTAAAAGACACATTCAAAACACTGCTGTCCATATACACAAACTGCTGAAATACAAATTGAGGGATACAAGTATTCCACTGCCACTGTTCCAGGGAATCGATGGGTCCTGCGAACGGATAGCTGTCGATATGAATACCATTTTCCTTCATCTATTTTTACCTGCTAC AAGATTAAAGTACGATTTAGAA ] [+] EMBL CD139678 [ TGTAACTTCCTAGCTCCTTATATGGTTATTGGAAGTGGTTTATCTAAAAGACACATTCAAAACACTGCTGTCCATATACACAAACTGCTGAAATACAAATTGAGGGATACAAGTATTCCACTGCCACTGTTCCAGGGAATCGATGGGTCCTGCGAATGGATAGCTGTCGATATGAATACCATTTTCCTTCATCTATTTTTACCTGCTACAAAGATT AAGTACGATTTAGAATCGCTCTGGGGCGCTGGTCCACAATATGATGACC ACTTTTTCAG AAAACACAGCAGAA TATCGAATAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||