Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8186 cluster # 8186       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8186#0 length = 858 sequences # 6  

consensusID : consensus_8186#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 858
fasta sequence
                              [TGGAAGGTTTAGATGAATTTAAAATTACGGACCAAGAAGGATTAAGATATGAAGATGAGTAGGGAATGGTTGGTGTATTTTCACTAATTTGCCGGAGCTGTTTATCAAGACAATTAGATTTTGTAGATGAATAAGATGAAGATGAATCAGAAGATGTTTTACTGGAACTGCCTGAACGCCAATAATGCAAATGAACAGGAAGATCCATATTTTGAAGTCGGGAATACGAAGAAGATACTGCAGTTGAACAAGGAGATTTATCATTAACAGCTGTTGTAACAGGTTTAGTAACGGACATGACGGATGCTATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAATGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAGAATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGACATGATAATCTACTATCCGGAGGAAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATACCAGATACAGGAGATTGAGAAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTGATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCATACCGGAAGAACAAGAATTTGAATCTAAAATTGTTTGTGAATGGTCAATACTATTAGTTTGTTTATTTTTATGCTTATCATCAATACCTATGGAAGGATTTGTAAAGGAACAAGAATGTGGAAAACCAGATATCGTTT]

[+] EMBL CD178745             [TGGAAGGTTTAGATGAATTTAAAATTACGGACCAAGAAGGATTAAGATATGAAGATGAGTAGGGAATGGTTGGTGTATTTTCACTAATTTGCCGGAGCTGTTTATCAAGACAATTAGATTTTGTAGATGAATAAGATGAAGATGAATCAGAAGATGTTTTACTGGAACTGCCTGAACGCCAATAATGCAAATGAACAGGAAGATCCATATTTTGAAGTCGGGAATACGAAGAAGATACTGCAGTTGAACAAGGAGATTTATCATTAACAGCTGTTGTAACAGGTTTAGTAACGGACATGACGGATGCTATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAATGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAGAATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGACATGATAATCTACTATCCGGAGGAAATGTCTGAATGTTTAAATNTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGG                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD178735             [                                                  GAAGATGAGTAGGGAATGGTTGGTGTATTTTCACTAATTTGCCGGAGCTGTTTATCAAGACAATTAGATTTTGTAGATGAATAAGATGAAGATGAATCGGAAGATGTTTTACTGGAACTGCCTGAACGCCAATAATGCAAATGAACAGGAAGATCCATATTTTGAAGTCGGGAATACGAAGAAGATACTGCAGTTGAACAAGGAGATTTATCATTAACAGCTGTTGTAACAGGTTTAGTAACGGACATGACGGATGCTATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAATGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAGAATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGccttcca                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD156642             [                                                                                                                                                                                                                                             CTGCAGTTGAACAAGGAGATTTATCATTAACAGCTGTTGTAACAGGTTTAGTAACGGACATGACGGATGCTATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAATGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAGAATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGACATGATAATCTACTATCCGGAGGAAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATACCAGATACAGGAGATTGAGAAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTGATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCATACCGGAAGAACAAGAATTTGAATCTACAATTGTTTGCGAATGGCCAATACTATTAGCTTGTTTATTTTTATGCTTATCATC                                                        ]
[-] EMBL CD154687             [                                                                                                                                                                                                                                                                                                                    ATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAATGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAGAATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGACATGATAATCTACTATCCGGAGGAAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATACCAGATACAGGAGATTGAGAAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTGATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCATACCGGAAGAACAAGAATTTGAATCTAAAATTGTTTGTGAATGGTCAATACTATTAGTTTGTTTATTTTTATGCTTATCATCAATACCTATGGAAGGATTTGTAAAGGAACAAGAATGTGGAAAACCAGATATCGTTT]
[+] EMBL CD156319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATACCAGATACAGGAGATTGAGAAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTGATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCATACCGGAAGAACAAGAATTTGAATCTAAAATTGTTTGTGAATGGTCAATACTATTAGTTTGTT                                                                           ]
[-] EMBL CD156099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTCTATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATGCCAGATACAGGAGATTGAGAAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTGATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCATACCGGAAGAACAAGAATTTGAATCTAAAATTGTTTGTGAATGGTCAATACTATTAGTTTGTTT                                                                          ]


>consensus_8186#0 TGGAAGGTTTAGATGAATTTAAAATTACGGACCAAGAAGGATTAAGATATGAAGATGAGT AGGGAATGGTTGGTGTATTTTCACTAATTTGCCGGAGCTGTTTATCAAGACAATTAGATT TTGTAGATGAATAAGATGAAGATGAATCAGAAGATGTTTTACTGGAACTGCCTGAACGCC AATAATGCAAATGAACAGGAAGATCCATATTTTGAAGTCGGGAATACGAAGAAGATACTG CAGTTGAACAAGGAGATTTATCATTAACAGCTGTTGTAACAGGTTTAGTAACGGACATGA CGGATGCTATATGACTTGCAGTTGAACAAGTACGTAAGTTACTAACATTTACAGCTGAAA TGAGCTGTTTCCCGTCGTTCGATGATAAAGAGTCAGAGCGTGAATAATAGCCAGAGCTAG AATCAGACTCATTGGAATGAAGACGTGGTATAATTTCAGGGCATGATGTTTGTTGACATG ATAATCTACTATCCGGAGGAAATGTCTGAATGTTTAAATTTACTCGTTCATTAATTTTTC TATTTGGAATAGACCATGCTGTTTCGACTTGAGGAGATATACCAGATACAGGAGATTGAG AAAGTTCACCAATCGAAACCTCATCTCTAAGAAAGTCATGGAAAGCATAACCAATACTTG ATCCTACTAATTCAGTGGTACCTGAAGGGATATGAAAATGAAGGCTTGAGCGACTATCCA TACCGGAAGAACAAGAATTTGAATCTAAAATTGTTTGTGAATGGTCAATACTATTAGTTT GTTTATTTTTATGCTTATCATCAATACCTATGGAAGGATTTGTAAAGGAACAAGAATGTG GAAAACCAGATATCGTTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)