These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8224#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 884 fasta sequence [CGGCACGAGGTGAAACAACAACGTTGCACTGGGTTAGATTCAAGAACTACTGATCAATATGATTCCTGTAACTCAACTCTCCGTTCACATTTCACATCTCAA-ATA--AAACAAGTAT--TATCGGGAGAAAATTCACATTTTCCAGTGATAACAGGATTAAATTTACAACCTGATCTTACCCAGCAACAGTTGGTTCAATTTTTTATTAAGGTCTCTGACATACTGCGCAAAGGACCTCTAGATCGTTTAATGAGAGCTCGCTCAATGATTGAGCATCATTCTAGACAATTACAAGATATAATTTCAGCTCAACATTCCGAAGCAATGAAGCTAACATCTGAACGTCAAACTTTGCAATCTAAAGCTGAGGAGTTAGCAAAACGTCACTCTATAATCACTGAGCGTCAAAGTATGTTAGACAAACGTATGGCTAACTTAGCAACTCGTTTGGCCGCTTTAGGCGAAGGTCCTACCAAAGCTGAAATCGCAATGCGTAATGAAGTTATCGTGATTCGTGATCGTCTACACAAAGGCCTTAGGCAATGGTTATCAAATCTCAAGAACCGTCGTGACAAATTGGAAAGACAAATACTGTTGCGTAAAAAAACAGACAAATCATCTATTCGTAGCTCTCTACCTGGCAGCCTTCTTAGAACCACGGAAAATATCGAAGGAAATCAGTGGCAAACAGTATCAGAAGAACTTCGCCGGGAAACTTTGGAAATCAAGATGTTAATTAACGCAGTTAAAACGCTTAACACAAAGACTATAAATCCCACCTAGTACCTTATTTTATTTTCCCGTGCATAATTAATTCCAGAAAT-AATACTGAACCCGTTCATTTGGATTATTTTGTATATCTGTAAA-TAATTTTATGAGTAAATTAT] [+] EMBL CD077964 [CGGCACGAGGTGAAACAACAACGTTGCACTGGGTTAGATTCAAGAACTACTGATCAATATGATTCCTGTAACTCAACTCTCCGTTCACATTTCACATCTCAA ATA AAACAAGTAT TATCGGGAGAAAATTCACATTTTCCAGTGATAACAGGATTAAATTTACAACCTGATCTTACCCAGCAACAGTTGGTTCAATTTTTTATTAAGGTCTCTGACATACTGCGCAAAGGACCTCTAGATCGTTTAATGAGAGCTCGCTCAATGATTGAGCATCATTCTAGACAATTACAAGATATAATTTCAGCTCAACATTCCGAAGCAATGAAGCTAACATCTGAACGTCAAACTTTGCAATCTAAAGCTGAGGAGTTAGCANAACGTCACTCTATTATCACTGAG ] [+] EMBL CD080839 [ gCAACATANNAAACAAGTATTNTATCGGGAGAAAATTCACATTTTCCAGTGATAACAGGATTAAATTTACAACCTGATCTTACCCAGCAACAGTTGGTTCAATTTTTTATTAAGGTCTCTGACATACTGCGCAAAGGACCTCTAGATCGTTTAATGAGAGCTCGCTCAATGATTGAGCATCATTCTAGACAATTACAAGATATAATTTCAGCTCAACATTCCGAAGCAATGAAGCTAACATCTGAACGTCAAACTTTGCAATCTAAAGCTGAGGAGTTAGCAAAACGTCACTCTATAATCACTGAGCGTCAAAGTATGTTAGACAAACGTATGGCTAACTTAGCAACTCGTTTGGCCGCTTTAGGCGAAGGTCCTACCAAAGCTGAAATCGCAATGCGTAATGAAGTTATCGTGATTCGTGATCGTCTACACAAAGGCCTTAGGCAATGGTTATCAAATCTCAAGAACCGTCGTGACAAATTGGAAAGACAAATACTGTTGCGTAAAAAAACAGACAAATCATCTATTCGTAGCTCTCTACCTGGCAGCCTTCTTAGAACCACGGAAAATATCGAAGGAAATCAGTGGCAAACAGTATCAGAAGAACTTCGCCGGGAAACTTTGGAAATCAAGATGTTAATTAACGCAGTTAAAACGCTTAACACANAGACTATAAATCCCACCTAGTACCTTATTNTATTTTCCCGTGCATAATTAATTCCAGAAATAAATACTGAACCCGTTCATTTGGATTANTTTGTATATCTGTAAA TAATTNTATGAGTAAATTAT] [+] EMBL CD136651 [ AAACAAGTAT TATCGGGAGAAAATTCACATTTTCCAGTGATAACAGGATTAAATTTACAACCTGATCTTACCCAGCAACAGTTGGTTCAATTTTTTATTAAGGTCTCTGACATACTGCGCAAAGGACCTCTAGATCGTTTAATGAGAGCTCGCTCAATGATTGAGCATCATTCTAGACAATTACAAGATATAATTTCAGCTCAACATTCCGAAGCAATGAAGCTAACATCTGAACGTCAAACTTTGCAATCTAAAGCTGAGGAGTTAGCAAAACGTCACTCTATAATCACTGAGCGTCAAAGTATGTTAGACAAACGTATGGCTAACTTAGCAACTCGTTTGGCCGCTTTAGGCGAAGGTCCTACCAAAGCTGAAATCGCAATGCGTAATGAAGTTATCGTGATTCGTGATCGTCTACACAAAGGCCTTAGGCAATGGTTATCAAATCTCAAGAACCGTCGTGACAAATTGGAAAGACAAATACTGGTGCGTAAAAAAACAGACAAATCATCTATTCGTAGCTCTCTACCTGGCAGCCTTCTTAGAACCACG ] [+] EMBL CD183485 [ AAATTTACAACCTGATCTTACCCAGCAACAGTTGGTTCAATTTTTTATTAAGGTCTCTGACATACTGCGCAAAGGACCTCTAGATCGTTTAATGAGAGCTCGCTCAATGATTGAGCATCATTCTAGACAATTACAAGATATAATTTCAGCTCAACATTCCGAAGCAATGAAGCTAACATCTGAACGTCAAACTTTGCAATCTAAAGCTGAGGAGTTAGCAAAACGTCACTCTATAATCACTGAGCGTCAAAGTATGTTAGACAAACGTATGGCTAACTTAGCAACTCGTTTGGCCGCTTTAGGCGAAGGTCCTACCAAAGCTGAAATCGCAATGCGTAATGAAGTTATCGTGATTCGTGATCGTCTACACAAAGGCCTTAGGCAATGGTTATCAAATCTCAAGAACCGTCGTGACAAATTGGAAAGACAAATACTGTTGCGTAAAAAAACAGACAAATCATCTATTCG ] [+] EMBL CD138036 [ AAAATATCGAAGGAAATCAGTGGCAAACAGTATCAGAAGAACTTCGCCGGGAAACTTTGGAAATCAAGATGTTAATTAACGCAGTTAAAACGCTTAACACAAAGACTATAAATCCCACCTAGTACCTTATTTTATTTTCCCGTGCATAATTAATTCCAGAAAT AATACTGAACCCGTTCATTTGGATTATTTTGTATATCTGTAAATTAATTTTATGAGTA ] [-] EMBL CD137958 [ AAATATCGAAGGAAATCAGTGGCAAACAGTATCAGAAGAACTTCGCCGGGAAACTTTGGAAATCAAGATGTTAATCAACGCAGTTAAAACGCTTAACACAAAGATTATAAATCCCACCTAGTACCTTATTTTATTTTCCCGTGCATAATTAATTCCAGAAAT AATACTGAACCCGTTCATTTGGATTATTTTGTATATCTGTAAATTAATTTTATGAGTAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||