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Schistosoma mansoni
cluster # 8262 cluster # 8262       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8262#0 length = 1648 sequences # 6  

consensusID : consensus_8262#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1648
fasta sequence
                              [TCGTGCTCCTGAATGTGCACTGTTCGATGCCGCCGACGAATTGTTAGGTACTCATTTACCTGACTTGCAGTTATTAGCTCAAAGTGCTAATCAACTGCAAACTAC-TTTTTTGTGGATTCAATGG-GTCGTTTACACCAACAACAAGTACTTCTCACTCCGAA-TGGTGCTTGTCAATTAGGTTTACAAACTAATGGGCTATCAAATTATCAATTGCATTTGGGACGGTCTTTACGTCAGGGTCGTTCTATAGTTATGACTGTTGTTCGTCCACGTGGTATCAGTGGACGACCGGTGGCCGAATTTTTGCCTGGTGAACTGCGTAACAAAGATTATGTCAAAGGTTATATGGCTTCCGAGATATATAAGAAGGCTGTCAAAGATACTTTAGGTC-AAAAAACAACTCCTAAGAAACGTACTGGAACTGGTAAAATTCGGAAATCCGATCAAATTAATACATCAGCAGGGGAACGTTCTTGGCCTGGATCGACAACATCTAGTACGATTCCATTAGGCGAACTTAACACTGAAGTGGGCAATACAGGAGCACCTACCAAAAGAGTAACTTGTACATCCAACCAAATGGCGAGTTCACGAACCGGGTCAAATCGACCGAGTAAAGTTGACTTTGATGTTGGCGAAGACGCTGGTGGCGCAACAGGTGGTCTTCCTCCCCGACCAAAGAAACGGAAGTCTATGGGAATGCATAGAAGTTTAAGAGATCTTTGTTCAGATGCTCCATTCTCATCTGATGCCTATAACAATACCACTGCTAATACAGTTGTTGGTGGTGGTCCTAGATCTGATGCAACTCCAATCGACTACGATCCATTACATTTCATTCGTTGTCATGCTAAGGACAATGATGCAGGAGATAGTGAAACTAAAGTTTGGCGTTGTCTATTTGAGCCAAATCCAATGAGACCCGATGAAACAACTCACGTAGTTGCAACTTGTGGTGGTGAATGTGTCTGTCTAATCAACTGTGAAACTGGCAAAGTCATGAAACGTTTCAAACATATGGAAGAGGAATTTTATACCATAGCCTGGACAACTGTTGAGGTTGAAGGCAGTAAACGTACTAATATATTAGCTGCTGCAGGTCGTATGCATGAAATCAGACTACTTCATCCAGAACAGTTGGTTTGTTATGCAGAAATGAAAGGTCATACAGAAGATGTGACAGCTATGATATTTCATCAAACACAGTCTACAATTTTATTCAGTGGAGATTCTAAAGCATCTGTAATCGTTTGGGATATTGGAATTCCATCTGTTCCAGACTATAAAACACGTTATCAACTATTAATGCGTCTTCGTTGTCCTAGATTAGATGTGAATCCTGTATTAAATCTAGTTTTCCTTCCACATTATGCTTATTTAATAGCTGGTTGTGAAGATGGACTATTTGCATGGAAGATAACCGATCTACGTTTAGAGAAACGAGAACGTGAACCGGATATGGAGTTAAAATTGGACTTTAATCATGAAGTCTGTATTGATGCCTTAGCTCAGCTAAGCGATAATGCATTAGTTTTAAAAGTAGTGGAATCTGGTGAAATTATGGTATTCGATTTTGCATCTATTTTGGAACGACGTAAAGGACTTCAGCGTGTTGTTCCAATTGAAATGCGAGGTCACTTGCTATGGG]

[+] EMBL CD069332             [TCGTGCTCCTGAATGTGCACTGTTCGATGCCGCCGACGAATTGTTAGGTACTCATTTACCTGACTTGCAGTTATTAGCTCAAAGTGCTAATCAACTGCAAACTACTTTTTTTGTGGATTCAATGG GTCGTTTACACCAACAACAAGTACTTCTCACTCCGAA TGGTGCTTGTCACTTAGGTTTACAAACTAATGGGCTATCAAATTATCAATTGCATTTGGGACGGTCTTTACGTCAGGGTCGTTCTATAGTTATGACTGTTGTTCGTCCACGTGGTATCAGTGGACGACCGGTGGCCGAATTTATGCCTGGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD115524             [                                                             GACTTGCTGTTATTAGCTCAAAGTGCTAATCAACTGCTAACTAC TTTTTTGTGGATTCAATGGCGTAGTTTACACCAACAACAATTACTTCTCACTCCGAA TGGTGCTTGTCAATTAGGTTTACAAACTAATGGGCTATCAAATTATCAATTGCATTTGGGACGGTCTTTACGTCAGGGTCGTTCTATAGTTATGACTGTTGTTCGTCCACGTGGTATCAGTGGACGACCGGTGGCCGAATTTTTGCCTGGTGAACTGCGTAACAAAGATTATGTCAAAGGTTATATGGCTTCCGAGATATATAAGAAGGCTGTCAAAGATACTTTAGGTC AAAAAACAACTCCTAAGAAACGTACTGGAACTGGTAAAATTCGGAAATCCGATCAAATTAATACATCAGCAGGGGAACGTTCTTGGCCTGGATCGACAACATCTAGTACGATTCCATTAGGCGAACTTAACACTGAAGTGGGCAATACAGGAGCACCTACCAAAAGAGTAACTTGTACATCCAACCAAATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD115477             [                                                                                                                                                            CTCCGAACTGGTGTTTGTCAATTAGGTTTACAAACTAATGGGCTATCAAATTATCAATTGCATTTGGGACGGTCTTTACGTCAGGGTCGTTCTATACTTATGACTGTTGTTCGTCCACGTGGTATCAGTGGACGACCGGTGGCCGAATTTTTGCCTGGTGAACTGCGTAACAAAGATTATGTCAAAGGTTATATGGCTTCCGAGATATATAAGAAGGCTGTCAAAGATACTTTAGGTC AAAAAACAACTCCTAAGAAACGTACTGGAACTGGTAAAATTCGGAAATCCGATCAAATTAATACATCAGCAGGGGAACGTTCTTGGCCTGGATCGACAACATCTAGTACGATTCCATTACGCGAACTTAACACTGAAGTGGGCAATACAGGAGCACCTACCAAAAGAGTAACTTGTACATCCAACCACATGGCGAGTTCACGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD095053             [                                                                                                                                                                                                                                                                                                                                            TTATGTCAAAGGTTATATGGCTTCCGAGATATATAAGAAGGCTGTCAAAGATACTTTAGGTCAAAAAAACAACTCCTAAGAAACGTACTGGAACTGGTAAAATTCGGAAATCCGATCAAATTAATACATCAGCAGGGGAACGTTCTTGGCCTGGATCGACAACATCTAGTACGATTCCATTAGGCGAACTTAACACTGAAGTGGGCAATACAGGAGCACCTACCAAAAGAGTAACTTGTACATCCAACCAAATGGCGAGTTCACGAACCGGGTCAAATCGACCGAGTAAAGTTGACTTTGATGTTGGCGAAGACGCTGGTGGCGCAACAGGTGGTCTTCCTCCCCGACCAAAGAAACGGAAGTCTATGGGAATGCATAGAAGTTTAAGAGATCTTTGTTCAGATGCTCCATTCTCATCTGATGCCTATAACAATACCACTGCTAATACAGTTGTTGGTGGTGGTCCTAGATCTGATGCAACTCCAATCGACTACGATCCATTACATTTCATTCGTTGTCATGCTAAGGACAATGATGCAGGAGATAGTGAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD119251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGTCTATGGGAATGCATAGAAGTTTAAGAGATCTTTGTTCAGATGCTCCATTCTCATCTGATGCCTATAACAATACCACTGCTAATACAGTTGTTGGTGGTGGTCCTAGATCTGATGCAACTCCAATCGACTACGATCCATTACATTTCATTCGTTGTCATGCTAAGGACAATGATGCAGGAGATAGTGAAACTAAAGTTTGGCGTTGTCTATTTGAGCCAAATCCAATGAGACCCGATGAAACAACTCACGTAGTTGCAACTTGTGGTGGTGAATGTGTCTGTCTAATCAACTGTGAAACTGGCAAAGTCATGAAACGTTTCAAACATATGGAAGAGGAATTTTATACCATAGCCTGGACAACTGTTGAGGTTGAAGGCAGTAAACGTACTAATATATTAGCTGCTGCAGGTCGTATGCATGAAATCAGACTACTTCATCCAGAACAGTTGGTTTGTTATGCAGAAATGAAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BF936937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGTTTCAAACATATGGAAGAGGAATTTTATACCATAGCCTGGACAACTGTTGAGGTTGAAGGCAGTAAACGTACTAATATATTAGCTGCTGCAGGTCGTATGCATGAAATCAGACTACTTCATCCAGAACAGTTGGTTTGTTATGCAGAAATGAAAGGTCATACAGAAGATGTGACAGCTATGATATTTCATCAAACACAGTCTACAATTTTATTCAGTGGAGATTCTAAAGCATCTGTAATCGTTTGGGATATTGGAATTCCATCTGTTCCAGACTATAAAACACGTTATCAACTATTAATGCGTCTTCGTTGTCCTAGATTAGATGTGAATCCTGTATTAAATCTAGTTTTCCTTCCACATTATGCTTATTTAATAGCTGGTTGTGAAGATGGACTATTTGCATGGAAGATAACCGATCTACGTTTAGAGAAACGAGAACGTGAACCGGATATGGAGTTAAAATTGGACTTTAATCATGAAGTCTGTATTGATGCCTTAGCTCAGCTAAGCGATAATGCATTAGTTTTAAAAGTAGTGGAATCTGGTGAAATTATGGTATTCGATTTTGCATCTATTTTGGAACGACGTAAAGGACTTCAGCGTGTTGTTCCAATTGAAATGCGAGGTCACTTGCTATGGG]


>consensus_8262#0 TCGTGCTCCTGAATGTGCACTGTTCGATGCCGCCGACGAATTGTTAGGTACTCATTTACC TGACTTGCAGTTATTAGCTCAAAGTGCTAATCAACTGCAAACTACTTTTTTGTGGATTCA ATGGGTCGTTTACACCAACAACAAGTACTTCTCACTCCGAATGGTGCTTGTCAATTAGGT TTACAAACTAATGGGCTATCAAATTATCAATTGCATTTGGGACGGTCTTTACGTCAGGGT CGTTCTATAGTTATGACTGTTGTTCGTCCACGTGGTATCAGTGGACGACCGGTGGCCGAA TTTTTGCCTGGTGAACTGCGTAACAAAGATTATGTCAAAGGTTATATGGCTTCCGAGATA TATAAGAAGGCTGTCAAAGATACTTTAGGTCAAAAAACAACTCCTAAGAAACGTACTGGA ACTGGTAAAATTCGGAAATCCGATCAAATTAATACATCAGCAGGGGAACGTTCTTGGCCT GGATCGACAACATCTAGTACGATTCCATTAGGCGAACTTAACACTGAAGTGGGCAATACA GGAGCACCTACCAAAAGAGTAACTTGTACATCCAACCAAATGGCGAGTTCACGAACCGGG TCAAATCGACCGAGTAAAGTTGACTTTGATGTTGGCGAAGACGCTGGTGGCGCAACAGGT GGTCTTCCTCCCCGACCAAAGAAACGGAAGTCTATGGGAATGCATAGAAGTTTAAGAGAT CTTTGTTCAGATGCTCCATTCTCATCTGATGCCTATAACAATACCACTGCTAATACAGTT GTTGGTGGTGGTCCTAGATCTGATGCAACTCCAATCGACTACGATCCATTACATTTCATT CGTTGTCATGCTAAGGACAATGATGCAGGAGATAGTGAAACTAAAGTTTGGCGTTGTCTA TTTGAGCCAAATCCAATGAGACCCGATGAAACAACTCACGTAGTTGCAACTTGTGGTGGT GAATGTGTCTGTCTAATCAACTGTGAAACTGGCAAAGTCATGAAACGTTTCAAACATATG GAAGAGGAATTTTATACCATAGCCTGGACAACTGTTGAGGTTGAAGGCAGTAAACGTACT AATATATTAGCTGCTGCAGGTCGTATGCATGAAATCAGACTACTTCATCCAGAACAGTTG GTTTGTTATGCAGAAATGAAAGGTCATACAGAAGATGTGACAGCTATGATATTTCATCAA ACACAGTCTACAATTTTATTCAGTGGAGATTCTAAAGCATCTGTAATCGTTTGGGATATT GGAATTCCATCTGTTCCAGACTATAAAACACGTTATCAACTATTAATGCGTCTTCGTTGT CCTAGATTAGATGTGAATCCTGTATTAAATCTAGTTTTCCTTCCACATTATGCTTATTTA ATAGCTGGTTGTGAAGATGGACTATTTGCATGGAAGATAACCGATCTACGTTTAGAGAAA CGAGAACGTGAACCGGATATGGAGTTAAAATTGGACTTTAATCATGAAGTCTGTATTGAT GCCTTAGCTCAGCTAAGCGATAATGCATTAGTTTTAAAAGTAGTGGAATCTGGTGAAATT ATGGTATTCGATTTTGCATCTATTTTGGAACGACGTAAAGGACTTCAGCGTGTTGTTCCA ATTGAAATGCGAGGTCACTTGCTATGGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)