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Schistosoma mansoni
cluster # 8295 cluster # 8295       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8295#0 length = 1312 sequences # 6  

consensusID : consensus_8295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1312
fasta sequence
                              [GAATGTGTTTATATTATGGTTTGTTTGTGTATCGAGGCACTGGCCGATGTTATTAAGGACGAATATGAGAGATTAGTAAGTTTTCGGGATTATTACAAGTAAAAAGGTGCTACGGGTGACAAAGGATGATAACTATGAAACTCAAGTCAAGAATAAATCACAAAAATCATTCCGAATGAAGTAAGCAGGTACATAATAATGGTAGTAATAATAAATAATATCAAACAACAACATTAACTAAAGTCAGTCGGGGAGAAAGACTACAAGGAAGACAAGCGAACGTTTGATACGACCGGTCCGACAAAAAATTTGACTGAAATAACTGACAACAAATGAAAAAAATGACATTTATAGGTAGCATTTGGTTCACAATGAAATGGGTGCATTTATTCCATTTGTATAGTGATTACGTGGTGTGATGTAAATATGAATGTGAATGTCGTAAATACGAAAAGTCGAGTTTCCTATTATCTTATTTAACTAGGAAAAATAAAGAATGAGCAAACATAGTAAAAAAAACAATGACGATGATAATGATGAACGTTACGTCAAAAATGAGGACAGATCATAGCATAACACGTGGTTCCATGTATAAAGAAAGAGATATAACAACTCTGTGACTTAAAATTCTTATTCTCCTTTGTAGAAGGCACACGAACAACAATACGTTGAAATAATATAGCAATATTAATAATTGGAAAGACAAGAAGAACGGAAAAATCTGAACCAAAATAAAAACACGAAATAAAAAAGCACTACTCACAATTTTTTTAATTGCAAAGCCGAATAGTTATAATGTAGATGAGGATGTGCGTTGAGAGAAAAAGCAAATTAAATTTTACATTAAGATAAGTGAGTGATGATCCAATGACAACAAAGACAATGAAGTCGAGGTATTTCTTTTGTGAGTATAGTATAAACCAAGTAGTAATAAATTCAAGGTTAAGTA-CCACAGAAACATTTACACACACAAATTTAGATGCCTATTAATGTTATAAATTCCATAAACTATTCGTACGACTAGTGTCATTATTTATGGAAGCTGAACTACAACAAATCCCATTCTTTTTATTATGCTCCTCACCTACACTCCCATCCGAAACTCGGCGGGGTATCAAACCATTAGCAGAACTATCATTGGTCACACCATTCCGTCTAACTGGTATTGAAATATTGGATATAGGAGAGACAGCTCGAATTCCTAGAACAGGAGACTGAGTGGAACTTTTTGGATTTAATCTTTCACATGAAGTGATAGAAGAATACAGACCTGTGGTTATATCTAAATTATGACTTTCTACCGATCCACAAA]

[+] EMBL CD091386             [GAATGTGTTTATATTATGGTTTGTTTGTGTATCGAGGCACTGGCCGATGTTATTAAGGACGAATATGAGAGATTAGTAAGTTTTCGGGATTATTACAAGTAAAAAGGTGCTACGGGTGACAAAGGATGATAACTATGAAACTCAAGTCAAGAATAAATCACAAAAATCATTCCGAATGAAGTAAGCAGGTACATAATAATGGTAGTAATAATAAATAATATCAAACAACAACATTAACTAAAGTCAGTCGGGGAGAAAGACTACAAGGAAGACAAGCGAACGTTTGATACGACCGGTCCGACAAAAAATTTGACTGAAATAACTGACAACAAATGAAAAAAATGACATTTATAGGTAGCATTTGGTTCACAATGAAATGGGTGCATTTATTCCATTTGTATAGTGATTACGTGGTGTGATGTAAATATGAATGTGAATGTCGTAAATACGAAAAGTCGAGTTTCCTATTATCTTATTTAACTAGGAAAAATAAAGAATGAGCAAACATAGTAAAAAAAACAATGACGATGATAATGATGAACGTTACGTCAAAAATGAGGACAGATCATAGCATAACACGTGGTTCCATGTATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD111025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAATGAGCAAACATAGTAAAAAAAACAATGACGATGATGATGATGAACGTTACGTCAAAAATGAGGACAGATCATAGCATAACACGTGGTTCCATGTATAAAGAAAGAGATATAACAACTCTGTGACTTAAAATTCTTATTCTCCTTTGTAGAAGGCACACGAACAACAATACGTTGAAATAATATAGCAATATTAATAATTGGAAAGACAAGAAGAACGGAAAAATCTGAACCAAAATAAAAACACGAAATAAAAAAGCACTACTCACAATTTTTTTAATTGCAAAGCCGAATAGTTATAATGTAGATGAGGATGTGCGTTGAGAGAAAAAGCAAATTAAATTTTACATTAAGATAAGTGAGTGATGATCCAATGACAACAAAGACAATGAAGTCGAGGTATTTCTTTTGTGAGTATAGTATAAACCAAGTAGTAATAAATTCAAGGTTAAGTA CCACAGAAACATTT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD071862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGGTTCCATGTATAAGGAAAGAGATATAACAACTCTGTGACTTAAAATTCTTATTCTCCTTTGTAGAAGGCACACGAACAACAATACGTTGAAATAATATAGCAATATTAATAATTGGAAAGACAAGAAGAACGGAAAAATCTGAACCAAAATAAAAACACGAAATAAAAAAGCACTACTCACAATTTTTTTAATTGCAAAGCCGAATAGTTATAATGTAGATGAGGATGTGCGTTGAGAGAAAAAGCAAATTAAATTTTACATTAAGATAAGTGAGTGATGATCCAATGACAACAAAGACAATGAAGTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD072376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAAAGACAAGAAGAACGGAAAAATCTGACCCAAAATAAAAACACGAAATAAAAAAGCACTACTCACAATTTTTTTAATTGCAAAGCCGAATAGTTATAATGTAGATGAGGATGTGCGTTGAGAGAAAAAGCAAATTAAATTTTACATTAAGATAAGTGAGTGATGATCCAATGCCACCACTGCCAATGAAGTCGAGGTATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD063872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gagtgAAATT AATTTTACATTAAGAT AGTGAGTGATGATCCAATGACAACAAAGACAATGAAGTCGAGGTATTTCTTTTGTGAGTATAGTATAAACCAAGTAGTAATAAATTCAAGGTTAAGTA CCACAGAAACATTTACACACACAAATTTAGATGCCTATTAATGTTATAAATTCCATAAACTATTCGTACGACTAGTGTCATTATTTATGGAAGCTGAACTACAACAAATCCCATTCTTTTTATTATGCTCCTCACCTACACTCCCATCCGAAACTCGGCGGGGTATCAAACCATTAGCAGAACTATCATTGGTCACACCATTCCGTCTAACTGGTATTGAAATATTGGATATAGGAGAGACAGCTCGAATTCCTAGAACAGGAGACTGAGTGGAACTTTTTGGATTTAATCTTTCACATGAAGTGATAGAAGAATACAGACCTGTGGTTATATCTAAATTATGACTTTCTACCGATCCACAAA]
[-] EMBL CD068442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGAAGTCGAGGTATTTCTTTTGTGAGTATAGTATAAACCAAGTAGTAATAAATTCAAGGTTAAGTATCCACAGAAACATTTACACACACAA                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_8295#0 GAATGTGTTTATATTATGGTTTGTTTGTGTATCGAGGCACTGGCCGATGTTATTAAGGAC GAATATGAGAGATTAGTAAGTTTTCGGGATTATTACAAGTAAAAAGGTGCTACGGGTGAC AAAGGATGATAACTATGAAACTCAAGTCAAGAATAAATCACAAAAATCATTCCGAATGAA GTAAGCAGGTACATAATAATGGTAGTAATAATAAATAATATCAAACAACAACATTAACTA AAGTCAGTCGGGGAGAAAGACTACAAGGAAGACAAGCGAACGTTTGATACGACCGGTCCG ACAAAAAATTTGACTGAAATAACTGACAACAAATGAAAAAAATGACATTTATAGGTAGCA TTTGGTTCACAATGAAATGGGTGCATTTATTCCATTTGTATAGTGATTACGTGGTGTGAT GTAAATATGAATGTGAATGTCGTAAATACGAAAAGTCGAGTTTCCTATTATCTTATTTAA CTAGGAAAAATAAAGAATGAGCAAACATAGTAAAAAAAACAATGACGATGATAATGATGA ACGTTACGTCAAAAATGAGGACAGATCATAGCATAACACGTGGTTCCATGTATAAAGAAA GAGATATAACAACTCTGTGACTTAAAATTCTTATTCTCCTTTGTAGAAGGCACACGAACA ACAATACGTTGAAATAATATAGCAATATTAATAATTGGAAAGACAAGAAGAACGGAAAAA TCTGAACCAAAATAAAAACACGAAATAAAAAAGCACTACTCACAATTTTTTTAATTGCAA AGCCGAATAGTTATAATGTAGATGAGGATGTGCGTTGAGAGAAAAAGCAAATTAAATTTT ACATTAAGATAAGTGAGTGATGATCCAATGACAACAAAGACAATGAAGTCGAGGTATTTC TTTTGTGAGTATAGTATAAACCAAGTAGTAATAAATTCAAGGTTAAGTACCACAGAAACA TTTACACACACAAATTTAGATGCCTATTAATGTTATAAATTCCATAAACTATTCGTACGA CTAGTGTCATTATTTATGGAAGCTGAACTACAACAAATCCCATTCTTTTTATTATGCTCC TCACCTACACTCCCATCCGAAACTCGGCGGGGTATCAAACCATTAGCAGAACTATCATTG GTCACACCATTCCGTCTAACTGGTATTGAAATATTGGATATAGGAGAGACAGCTCGAATT CCTAGAACAGGAGACTGAGTGGAACTTTTTGGATTTAATCTTTCACATGAAGTGATAGAA GAATACAGACCTGTGGTTATATCTAAATTATGACTTTCTACCGATCCACAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)