These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8299#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 899 fasta sequence [CATCGTTAACCAGCTGTGGAACAACCTTACCTGGTGCAATATCTCAACAAAATGCTTTCGTATATCTTCCGCTCGTTGACAGACAAGGAGTTTTGTTACCAATACATTTTACTACAGAAAAAGAGGCTAAAATGTCTCATACACTTCTTCAAGAATGGTTAGATGTGGTATGTACAAGACGGGGACTACCGCTTGCCCGATTGCGATTACATTCAAAACACGTACTTGTCGATAACATGGTAGAAGAATGGCTAGATTCCTATCGTTCGTTAGCTAAATTATCTACTAATAGTAATCCTATTACATCAACTGCACCATCTAATATCAATAACATCAACACTACTATTTCTTCTATTACTGGCTCTACAACTATTCAGCATACTCATCTCGTCAGTG-AACATTCATCATCATCG-AATTCCATATCATCTG-ATACAGATCAAGTTGAGTATACATCAAAATCAACATCATCATCTTCAGATGCACTACGCAGCTCTAGTCCCTAATCTTATTGTAAATCCATATGTTACTG-ATAATTTATTT-GTTGTG-AAGTTTATATACAAAG-AAAATATCAACCAACTACTTACTTTTTAATATATTATGGCTGTGATATATTTTATTCCTTTGTTTTTCCTTCGTTAAGAAAAGGTTGTCCACTTCCTTACTATATTCCACTTCTTACAGTTCTTTCTAGATATTCTTTTTTAGTGGGCCCCTTTCTATTCCT-AATGTGTATTTTTTTGTTCATTTATT-GTTATTATTCACCAGATATATTTACCCTTCAATTACTATAGACATAATAAACATGTTTGTAATAAAGAACATGAAATTGTTTTAGTTTTTCTCTTCTTTTTAATCTCAATTTTCAATATATATATATTAAACAAAAACCGATTACGCAC] [+] EMBL CD161040 [CATCGTTAACCAGCTGTGGAACAACCTTACCTGGTGCAATATCTCAACAAAATGCTTTCGTATATCTTCCGCTCGTTGACAGACAAGGAGTTTTGTTACCAATACATTTTACTACAGAAAAAGAGGCTAAAATGTCTCATACACTTCTTCAAGAATGGTTAGATGTGGTATGTACAAGACGGGGACTACCGCTTGCCCGATTGCGATTACATTCAAAACACGTACTTGTCGATAACATGGTAGAAGAATGGCTAGATTCCTATCGTTCGTTAGCTAAATTATCTACTAATAGTAATCCTATTACATCAACTGCACCATCTAATATCAATAACATCAACACTACTATTTCTTCTATTACTGGCTCTACAACTATTCAGCATACTCATCTCGTCAGTG AACATTCATCATCATCG AATTCCATATCATCTG ATACAGATCAAGTTGAGTATACATCAAAATCAACATCATCATCTTCAGATGCACTACGCAGCTCTAGTCCCTAATCTTATTGTAAATCCATATGTTACTG ATAATTTATTT GTTGTG AAGTTTATATACA ] [+] EMBL AW146488 [ ACAGACAAGGAGTTTTGTTACCAATACATTTTACTACAGAAAAAGAGGCTAAAATGTCTCATACACTTCTTCAAGAATGGTTAGATGTGGTATGTACAAGACGGGGACTACCGCTTGCCCGATTGCGATTACATTCAAAACACGTACTTGTCGATAACATGGTAGAAGAATGGCTAGATTCCTATCGTTCGTTAGCTAAATTATCTACTAATAGTAATCCTATTACATCAACTGCACCATCTATTATTCATAAC ] [+] EMBL CD114347 [ CGGGGACTACCGCTTGCCCGATTGCGATTACATTCAAAACACGTACTTGTCGATAACATGGTAGAAGAATGGCTAGATTCCTATCGTTCGTTAGCTAAATTATCTACTAATAGTAATCCTATTACATCAACTGCACCATCTAATATCAATAACATCAACACTACTATTTCTTCTATTACTGGCTCTACAACTATTCAGCATACTCATCTCGTCAGTG AACATTCATCATCATCG AATTCCATATCATCTG ATACAGATCAAGTTGAGTATACATCAAAATCAACATCATCATCT ] [+] EMBL AA559758 [ CACCATCTAATATCAATAACATCAACACTACTATTTCTTCTATTACTGGCTCTACAACTATTCAGCATACTCATCTCGTCAGTGAAACATTCATCATCATCGAAATTCCATATCATCTGAATACAGATCAAGTTGAGTATACATCAAAATCAACATCATCATCTTCAGATGCACTACGCAGCTCTAGTCCCTAATCTTATTGTAAATCCATATGTTACTGAATAATTTATTTGGTTGTGAAAGTTTATATACAAAGAAAAATATCAACCAACTACTTACTTTTTAATATATTA ] [+] EMBL CD156231 [ TG ATAATTTATTT GTTGTG AAGTTTATATACAAAG AAAATATCAACCAACTACTTACTTTTTAATATATTATGGCTGTGATATATTTTATTCCTTTGTTTTTCCTTCGTTAAGAAAAGGTTGTCCACTTCCTTACTATATTCCACTTCTTACAGTTCTTTCTAGATATTCTTTTTTAGTGGGCCCCTTTCTATTCCT AATGTGTATTTTTTTGTTCATTTATT GTTATTATTCACCAGATATATTTACCCTTCAATTACTATAGACATAATAAACATGTTTGTAATAAAGAACATGAAATTGTTTTAGTTTTTCTCTTCTTTTTAATCTCAATTTTCAATATATATATATTAAACAAAAACCGATTACGCAC] [+] EMBL CD156317 [ TG ATAATTTATTT GTTGTG AAGTTTATATACAAAG AAAATATCAACCAACTACTTACTTTTTAATATATTATGGCTGTGATATATTTTATTCCTTTGTTTTTCCTTCGAAAAGAAAAGGTTGTCCACTTCCTTATTATATTCCACTTCTTACAGTTCTTTTAAAATATTTTTTTTGAGGGGGCCCTTTTCTA TCCTAAATGTGTATTTTTTTGTTCA TTATTGGGTATTATTCACCAGATATATTTACCCTTCAATTACTATAGACATAATAAACATGTTTGTGATAAAGAACATGGAATTGTTTTAGTTTTTCTCTTCTTTTTAATCTCAATTTTCAATATATATATATTAAACAAAAACCGATTACGCAC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||