Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8408 cluster # 8408       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8408#0 length = 890 sequences # 6  

consensusID : consensus_8408#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 890
fasta sequence
                              [GTGAAATTTACAGAAACAAGTTGTCTATATGCTTGCTTTTCTATACTACTTTATGTTAGTTATGATATATTGTGGAAAAACAAACAATAATGACGATAGTGTACTATTAATTTAGCCAAGTCATATCGCATCCCACTACATTCATTCCTAAAGCAGTTCCAGACTTCTCTGTATGTCAGGTTTTTAAACCTTCCTTTACAATGTTGCGTCGTGTAAAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA--AACTG-A-TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAGCATGATTCAGGTAGAAGTTCAACCAGAGAATCAGCAGATGTTTCTGTAGCATCCGAAAGGCCCAAAAAA]

[+] EMBL CD094425             [GTGAAATTTACAGAAACAAGTTGTCTATATGCTTGCTTTTCTATACTACTTTATGTTAGTTATGATATATTGTGGAAAAACAAACAATAATGACGATAGTGTACTATTAATTTAGCCAAGTCATATCGCATCCCACTACATTCATTCCTAAAGCAGTTCCAGACTTCTCTGTATGTCAGGTTTTTAAACCTTCCTTTACAATGTTGCGTCGTGTAAAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGGAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAG AAACGTCGAANAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCANATGAGTCACAGACTAATATTTCACAGAGACCAGATGA  AACTGNA TG TAGTCCATC                                                                                                                                                                                                                                                                   ]
[-] EMBL CD184896             [                                                                                                                                                                                                                       AAGCGAAAATCAAGTAAGAGTAGGACACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATCGGTCGGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCCTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGGGACAAGATGA  AACTG A TGTTAGTCCATCAGAAGGATCCCT ACACCAACCGCTGATGAAA                                                                                                                                                                                                                                   ]
[+] EMBL CD068309             [                                                                                                                                                                                                                                                                                         TTATCATGTCTGTTCCCTCGGTCAGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAAGATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAAATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCCTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA  AACTG A TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGAT                                                                        ]
[-] EMBL CD070569             [                                                                                                                                                                                                                                                                                                                                                                               AATGGCAAAACAGTCCGCTACATTAACAGCTGGCTCCACATGATCTTCTGGACATGAGACAAGATCAGAAAGCAAACCTNTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTNTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTTCCGCTTATTCTTCAGGTTTAATGTCACCTGACGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA  AACTG A TGTTAGTCCATCAGAA                                                                                                                                                                                                                                                               ]
[+] EMBL CD119870             [                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCATTATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCTTCAGGTTTAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAACAGAGACAAGATGA  AACTG A TGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATGAAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAG                                                                     ]
[+] EMBL CD068305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGACCAGATGACCAACTG ACTGTTAGTCCATCAGAAGGATCCCTAACA CAACCGCTGATGAAAGCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATGCCTATAACTATCCAGGTGATGAGACAAATAAAAGTCCAACAGATGAAAACTCACATATTATATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAGCATGATTCAGGTAGAAGTTCAACCAGAGAATCAGCAGATGTTTCTGTAGCATCCGAAAGGCCCAAAAAA]


>consensus_8408#0 GTGAAATTTACAGAAACAAGTTGTCTATATGCTTGCTTTTCTATACTACTTTATGTTAGT TATGATATATTGTGGAAAAACAAACAATAATGACGATAGTGTACTATTAATTTAGCCAAG TCATATCGCATCCCACTACATTCATTCCTAAAGCAGTTCCAGACTTCTCTGTATGTCAGG TTTTTAAACCTTCCTTTACAATGTTGCGTCGTGTAAAGCGAAAATCAAGTAAGAGTAGGA CACCGGTGACCGGTAGTTCAAATGAAAGAGGCTGTTCCACATTACCACGTATGTTCCATC GGTCGGATAGTGAAGAAGATATTTCAGAAAAGCCGTCATCATCTTCCAATAGATTAACAA GATGGACAATGGAAAAAAAGTCCGCTACATTAACAGCTGGCTCCACATTATCTTCTGGAA ATGAGACAAAATCAAAAAGCAAACCTTTCACATTTCTGCGTACATTATCTCTGGGTTCAT TATTTTCTCCCTCAAGAAAACGTCGAAAAGATGATTCAACTACCGCTTATTCTTCAGGTT TAATGTCACCTGATGTAGAGTTACAAACATTATCAAATGAGTCACAGACTAATATTCAAC AGAGACAAGATGAAACTGATGTTAGTCCATCAGAAGGATCCCTAACACCAACCGCTGATG AAACCTATCGACCTCAGTTTTGTAAGCAAGAGTTATACTTAGAGAAATTAACAAGAGATG CCTATAACTATCCAGGAGATGAGACAAATAAAACTCCAACAGATGAAAACTCACATATTA TATCTGAAGGAAAACATCTGAAAAGATGTCCAGATGATCAGCATGATTCAGGTAGAAGTT CAACCAGAGAATCAGCAGATGTTTCTGTAGCATCCGAAAGGCCCAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)