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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8619 cluster # 8619       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8619#0 length = 965 sequences # 7  

consensusID : consensus_8619#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 965
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTATACCCTGACTCAGTAGAAAATAGATTTATAAAGGCACAGACAGCAAAAAGATAAAATATACTGAGTGATGAATCACAGTTTTGGACTTTTTACAATTAGAGGCATAAAATTTTATTCAGGTATTAACAGAAGTTATTGGACTAATGGAATTCGGC-AGACCACCACTGTAGTTAGCCTGAAGACATAAGTACAGAATTGCGAGAAATAGATTAAGTCCCAAAAGACTACTACCAAGGATAAGAACAACAGTAAAAACCATATTCCTCTTTGGACGCCATAATAATACGCCTGGAAGACATAAATCCNANAACGCTTTCCAAAATCCATTGACCATCAAGAGCGTAACAAGGCACGACATTGAGTATCACAAGGNCACCGGATAAGGAGAACAGATACGTGCATAGTAATCCAAGGAAGGAAGGCAAATTTGGCGAAAGTATGGAAGGCCAACGTGGGACATAATCGGAAACCCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATTGCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGACTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATTCCATTGTTATTGCCACGTATAGCACCAAGATTACCACAATCAGATGTCACATTGCAGCTGGTACGCTCAGTCACAGCACGTGCCGGCAAGCAAGCATATCTTCGGGATGTAGAACTCAGCTTTGTAGGTGTTATATAGGTGAAACACAAATGAGTTGACGCTGACTGAACTGTGCAACAATCTTCATTTAGTTTATTTTGATTGCTGACTGATTCGAAACTATCATTTTCATCCAATTTATTGACAGAAACAACCGCAGATAAACTACGACGTGGAACAGAGGCTNTATTATCTATCATGCTTAA]

[+] EMBL AI394995             [TTTTTTTTTTTTTTTTTTTTTTTATACCCTGACTCAGTAGAAAATAGATTTATAAAGGCACAGACAGCAAAAAGATAAAATATACTGAGTGATGAATCACAGTTTTGGACTTTTTACAATTAGAGGCATAAAATTTTATTCAGGTATTAACAGAAGTTATTGGACTAATGGAATTCGGC AGACCACCACTGTAGTTAGCCTGAAGACATAAGTACAGAATTGCGAGAAATAGATTAAGTCCCAAAAGACTACTACCAAGGATAAGAACAACAGTAAAAACCATATTCCTCTTTGGACGCCATAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL SM6451               [                                                                                                                                                TATTAACAGAAGTTATTGGACTAATGGAATTCCGCTAGACCACCACTGTAGTTAGCCTGAAGACATAAGTACAGAATTGCGAGAAGTAGATTAAGTCCCNAAAGACTACTACCAAGGATAAGANCAACAGTAAAAACCATGTTCCTCTTTGGACGCGATAATAATACGCCTGGAAGACATAAATCCNANAACGCTTTCCAAAATCCATTGACCATCAAGAGCGTAACAAGGCACGACATTGAGTATCACAAGGNCACCGGATAAGGAGAACAGATACGTGCATAGTAATCCNAGGAAGGAAGGCAAATTTGGCGAAAGNATGGAAGNCCAACGTGGGACATAATCGGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL SM503                [                                                                                                                                                                                                                                                                                                                                                                                                                  aGATAAGGAGAACAGATACGTGCATAGTAATCCAAGGAAGGAAGGCAAATTTGGCG AAGTATGGAAGGCCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BG932579             [                                                                                                                                                                                                                                                                                                                                                                                                                         cAGAACAGATACGTGCATAGTAATCCAAGGAAGGAAGGCAAATTAGGCGAAAGTATGGAAGGCCAACGTGGGACATAATCGGAAACCCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATTGCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGACTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATTCCATTGTTAct                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD093567             [                                                                                                                                                                                                                                                                                                                                                                                                                              CAGATACGTGCATAGTAATCCAAGGAAGGAAGGCAAATTAGGCGAAAGTATGGAAGGCCAACGTGGGACATAATCGGAAACCCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATTGCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGACTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATTCCATTGTTATTGCCACGTATAGCACCAAGATTACCACAATCAGATGTCACATTGCAGCTGGTACGCTCAG                                                                                                                                                                                                                                           ]
[+] EMBL CD154684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATTGCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGACTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATTCCATTGTTATTGCCACGTATAGCACCAAGATTACCACAATCAGATGTCACATTGCAGCTGGTACGCTCAGTCACAGCACGTGCCGGCAAGCAAGCATATCTTCGGGATGTAGAACTCAGCTTTGTAGGTGTTATATAGGTGAAACACAAATGAGTTGACGCTGACTGAACTGTGCAACAATCTTCATTTAGTTTATTTTGATTGCTGACTGATTCGAAACTATCATTTTCATCCAATTTATTGACAGAAACAACCGCAGATAAACTACGACGTGGAACAGAGGCTNTATTATCTATCATGCTTA ]
[-] EMBL CD154326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATTGCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGACTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATTCCATTGTTATTGCCACGTATAGCACCAAGATTACCACAATCAGATGTCACATTGCAGCTGGTACGCTCAGTCACAGCACGTGCCGGCAAGCAAGCATATCTTCGGGATGTAGAACTCAGCTTTGTAGGTGTTATATAGGTGAAACACAAATGAGTTGACGCTGACTGAACTGTGCAACAATCTTCATTTAGTTTATTTTGATTGCTGACTGATTCGAAACTATCATTTTCATCCAATTTATTGACAGAAACAACCGCAGATAAACTACGACGTGGAACAGAGGCTTTATTATCTATCATGCTTAA]


>consensus_8619#0 TTTTTTTTTTTTTTTTTTTTTTTATACCCTGACTCAGTAGAAAATAGATTTATAAAGGCA CAGACAGCAAAAAGATAAAATATACTGAGTGATGAATCACAGTTTTGGACTTTTTACAAT TAGAGGCATAAAATTTTATTCAGGTATTAACAGAAGTTATTGGACTAATGGAATTCGGCA GACCACCACTGTAGTTAGCCTGAAGACATAAGTACAGAATTGCGAGAAATAGATTAAGTC CCAAAAGACTACTACCAAGGATAAGAACAACAGTAAAAACCATATTCCTCTTTGGACGCC ATAATAATACGCCTGGAAGACATAAATCCNANAACGCTTTCCAAAATCCATTGACCATCA AGAGCGTAACAAGGCACGACATTGAGTATCACAAGGNCACCGGATAAGGAGAACAGATAC GTGCATAGTAATCCAAGGAAGGAAGGCAAATTTGGCGAAAGTATGGAAGGCCAACGTGGG ACATAATCGGAAACCCCTATAGAAGCTACAAGATCTTCCAATGGACCCAGGAAAAGAATT GCAGGGGCTTTATGGCGATTATGCACTAAGCGTACTAGACGAGTGGAATTGTCTGGGGGA CTTGGTACGACACAATGCATTGATCGAGTAGACATGACGCCCAGTGATTCACTCTGTATT CCATTGTTATTGCCACGTATAGCACCAAGATTACCACAATCAGATGTCACATTGCAGCTG GTACGCTCAGTCACAGCACGTGCCGGCAAGCAAGCATATCTTCGGGATGTAGAACTCAGC TTTGTAGGTGTTATATAGGTGAAACACAAATGAGTTGACGCTGACTGAACTGTGCAACAA TCTTCATTTAGTTTATTTTGATTGCTGACTGATTCGAAACTATCATTTTCATCCAATTTA TTGACAGAAACAACCGCAGATAAACTACGACGTGGAACAGAGGCTNTATTATCTATCATG CTTAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)