cluster # 8804

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Schistosoma mansoni
cluster # 8804 cluster # 8804 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8804#0 length = 946 sequences # 7
consensusID : consensus_8804#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 946
fasta sequence
                              [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTT-AACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG-AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCAC-AAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACCGAGCACCAGCCATTTGATGATCAACCGGCG-ATGCTGTTGCAGTT-ACTCAGATTATGATGCT--AGGTGATCAAGATCTCGATGTGGATTCTGATGAGTTAGA]

[+] EMBL BF936836             [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTT AACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAGAAGTTGTTTC                                                                                                                                                                                                                                                                    ]
[+] EMBL AI976429             [TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGA                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD083852             [                      cacgaggATGTCTTGTTCTATGGATCATC TGTTAATAATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD195595             [                                                                           AACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTCCTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAACTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD083853             [                                                                                                                                                                                    CTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTGTACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAGAACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACACAAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACTATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACA                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD062553             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATCCTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAAATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATCGGATATTGTTTCGTTCAACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCAC AAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACCGAGCACCAGCCATTTGATGATCAACCGGCG ATGCTGTTGCAGTT ACTCAGATTATGATGCT  AGGTGAT                                ]
[-] EMBL CD141063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAAACGAGCTCGTCTCACTGAAGAAAATCTACCAAAACCTGAAGTGCGTCTAGAG AGTTGTTTCGACACGCCGGATACAGATGAATCACAAAGTTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGCAGTCTTTGTGAATCGACGTCACAAAGGCCAAATACGTAATCGACATTTAGATAACCCAGTAGATACTGAGCACCAGCCATTTGATGATCAACCGGCGAATGCTGTTGCAGTTAACTCAGATTATGATGATAAAGGTGATCAAGATCTCGATGTGGATTCTGATGAGTTAGA]




>consensus_8804#0
TTTGTTGCATGGAGCAAATTTATGACCAAATGTCTTGTTCTATGGATCATCTTGTTAATA
ATGGTGATGAAATACAACCAGAAAAATTCTCGTCGATTTCCTCAACTAATATACTTACTC
CTATTGAAGGTTCAAACGAAACTTTTCGTCAAAGGCAATCAGACGTTTTTTCTGCACTAA
CTAGCCTGGAGGCAGCTCATCGTGAAGTGTACAAGGCTACGAAAGAAGAACGTAAAGCTG
TACGTAAAGCAGCTTGGCGTCATACAATTACTGCCCCAGAAAATTTAGCAGAGTTGAAAG
AACGTCGCGATCATGTTCAAACAGCTAGCGGTAAAGAGCACAAAACAACATGTCAAACAC
AAAATTCAACTTTCCGAAAACCTAACGCTCTCCCACCATCAACACATCGTCGACCAAACT
ATGTACATCGAGATCCCAGTAAATGGACACATTATAGTTTAGCTGATGTTAATGAAGATC
CTGATATTAGTGATAACTCACTCGCTATGGCTTTGATAAATGAGCTTCGACAATCTCGAA
ATAACACTGAAACTGTACAAGATGACGAAACTTGCCCAACAAATCCACGTCATAACAATC
GGATATTGTTTCGTTAACACGAGGTAAAAAACGAGCTCGTCTCACTGAAGAAAATCTACC
AAAACCTGAAGTGCGTCTAGAGAGTTGTTTCGACACGCCGGATACAGATGAATCACAAAG
TTCCACCGACGATTCAATATCTTTGTCTCATAATAGTGAAAGTTCGTGTGCTTCTGTGGC
AGTCTTTGTGAATCGACGTCACAAGGCCAAATACGTAATCGACATTTAGATAACCCAGTA
GATACCGAGCACCAGCCATTTGATGATCAACCGGCGATGCTGTTGCAGTTACTCAGATTA
TGATGCTAGGTGATCAAGATCTCGATGTGGATTCTGATGAGTTAGA
clustalw multiple alignements is not computed in this case