These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8899#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 854 fasta sequence [TAGTTCGGCTATATTGGCTTCAAACACG-TTACTAGCTGAATATCCTTACTACTAAATAGGTATGTTATCGCCAAATGACTCATTGCAACTGACGGATGAGGATGTGACAACATTAAGGAAGTGCAGGCAAATCTCATTTTGGAGAGGCAGTGTCCCATTCTCCATTGGTGCTCTTATAGCTGTTAGTGCTGCTGATAAATATGGATGGTTTTCAAAGCGTAAGATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATCTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACCCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGACCTCGAGAGGAATAATATGACATAAAGAGAAATATGTGCTTTGTGAAACACATTATTGTACGAATAGTAATATATTTAGTTGGTTTTATTTAANTCCTTNTAGATTNTGCTTCACACTCGNAGATATTGNTTTGGNTAGTAGCATATATACAGATAGNTAATTTATATGNTCATTTATCTATTNCA-TATCCCTGNTCAGGGAAGATTTTATTAGTGATTG-GAATACCCG] [+] EMBL CD079372 [TAGTTCGGCTATATTGGCTTCAAACACG TTACTAGCTGAATATCCTTACTACTAAATAGGTATGTTATCGCCAAATGACTCATTGCAACTGACGGATGAGGATGTGACAACATTAAGGAAGTGCAGGCAAATCTCATTTTGGAGAGGCAGTGTCCCATTCTCCATTGGTGCTCTTATAGCTGTTAGTGCTGCTGATAAATATGGATGGTTTTCAAAGCGTAAGATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATCTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACCCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTNTATTATGATACTGATGTCTATCGACCTCGAGAGGAATAATATGACATANAGAGAAATATGTGCTTTGTG AACACATTATTGTACGAATAGNTATATATTTAGTTGGTTTTATTTAANTCCTTNTAGATTNTGCTTCACACTCGNAGATATTGNTTTGGNTAGTAGCATATATACAGATAGNTAATTTATATGNTCATTTATCTATTNCA TATCCCTGNTCAGGGAAGATTTTATTAGTGATTG GAATACCC ] [+] EMBL CD078502 [ GCTTCAAACACGTTTACTAGCTGAATATCCTTACTACTAAATAGGTATGTTATCGCCAAATGACTCATTGCAACTGACGGATGAGGATGTGACAACATTAAGGAAGTGCAGGCAAATCTCATTTTGGAGAGGCAGTGTCCCATTCTCCATTGGTGCTCTTATAGCTGTTAGTGCTGCTGATAAATATGGATGGTTTTCAAAGCGTAAGATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATCTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACCCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGACCTCGAGAGG ATAATATG ] [+] EMBL CD082005 [ CTTACTACTAAATAGGTATGTTATCGCCAAATGACTCATTGCAACTGACGGATGAGGATGTGACAACATTAAGGAAGTGCAGGCAAATCTCATTTTGGAGAGGCAGTGTCCCATTCTCCATTGGTGCTCTTATAACTGTTAGTGCTGCTGATAAATATGGATGGTTTTCAAAGCGTAAGATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATCTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACTCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGACCTCGAGAGGAATAATATGACATANAGAGAAATATGTGCTTTGTGAAACACATTATTGTACGAATAGTAATATATTTta ] [+] EMBL BF936226 [ CATTCTCCATTGGTGCTCTTATAACTGTTAGTGCTGCTGATAAATATGGATGGTTTTCAAAGCGTAAGATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATCTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACTCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGACCTCGAGAGGAATAATATGACATAAAGAGAAATATGTGCTTTGTGAAACACATTATTGTACGAATAGTAAT ] [-] EMBL CD073649 [ GATGCTTCGATTACCATCTTACATTCTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTCTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCACCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATTTACGTCTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACCCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGACCTCGAGAGGAATAATATGACATAAAGAGAAATATGTGCTTTGTGAAACACATTATTGTACGAATAGTAATATATTTAGTTGTTTTTATTTAATTCCTTTTAGATTTTGCTTCACACTCGGAGATATTGTTTTGGTTAGTAGCATATATACAGATAGTTAATTTATATGTTCATTTATCTATTCAATTATCCCTGTTCAGTGAAGATTTTATTAGTGATTGTAAATACACG] [-] EMBL CD072974 [ TTCGATTACCATCTTACATTTTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTTTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACACCTGTGGAAAATCATCCCCCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATTTACGTTTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACCCAAACCTGTCGTACTTTGATAATGATAGACCAACTAGTTCATTTTATTATGATACTGATGTCTATCGCCCTCGAGAGGAATAATATGACATAAAGAGAAATATGTGCTTTGTGAAACACATTATTGTACGAATAGTAATATATTTA ] [-] EMBL CD075618 [ TACCATTTTACATTTTTGGAGTTACCATTGGTTATTTCGTTGGAAAACTTAGTTACGCGGGAGAGTGTAAACGTATGTTTTTTCAGCTTAACAATAGTCGAATCAAAGATGAGATCCTTAGAATGGAAACTACCGGAACATTTCAACCTACTCCTGGTTCACCTATAATTGTAAATACCCCTGTGGAAAATCATCCCCCTATGAATTATGAACAACGTAGACGGTTTTATAATAGGCAACTTGAACAATTTACGTTTCCATACCTCAGTTCCAAACCGCCGACAACGATTGAAGAAGAGAATACAACATCCGATAAAAGAAACTCAAACCCGTCGTACTTTGATAATGATAGACCAACTAGTTCCTTTTATTATGATACTGATGTCTATCGCCCTCGAGAGGAATAATATGACATAAAAAGAAATATGTGCTTTGTGAAACCCATTATTGTACGAATAGTAATATATTTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||